Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00512 ATGAAGTTCATAGGCTCAGTGTTAGTGGTGACTTTTGCTCTGGTTTTAGCCTCAACCTCAGCATCAGATCCTGATGCTCTTCAAGACCTCTGTGTTGCAGACACTAAATCTGGTGTTAAGGTGAATGGATTCACGTGTAAAGACGCTGCAAAAGTGAATGCATCTGATTTCTCATCAAACATATTAGCAAAACCAGGTGTGGCAGCAAACACAACCTTCGGTTCCATTGTAACAGGAGCCAACGTTGAAAAGATCCCAGGATTGAACACACTTGGTGTGTCTCTGGCACGCATTGACTATGCCCCAGGTGGACTCAACCCACCCCACACACACCCACGTGCCACTGAGATTGTGTTTGTTCTTGAAGGTCAACTTGATGTTGGGTTCATAACAACATCCAATGTTCTCATATCAAAGACCATCTACAAGGGTGAGATCTTTGTCTTCCCAAAAGGGTTGGTTCACTTCCAGAAGAACAATGCCAATGAACCTGCTGCAGTTATTTCAGCCTTCAACAGCCAATTGCCTGGAACACAATCTATTCCTCTGACTTTGTTTGCTGCCACCCCACCGGTCCCGGATAACGTGTTGACCAAGGCATTCCAGGTTGGTACCAAGGAGATTGAGAAAATCAAGTCTAGGCTTGCTCCCAAGAAGTAA 660 0.4576 MKFIGSVLVVTFALVLASTSASDPDALQDLCVADTKSGVKVNGFTCKDAAKVNASDFSSNILAKPGVAANTTFGSIVTGANVEKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFITTSNVLISKTIYKGEIFVFPKGLVHFQKNNANEPAAVISAFNSQLPGTQSIPLTLFAATPPVPDNVLTKAFQVGTKEIEKIKSRLAPKK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00512 219 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 10 217 - -
Adu06g00512 219 SMART Cupin_1_3 59 209 IPR006045 -
Adu06g00512 219 Gene3D Jelly Rolls 22 217 IPR014710 -
Adu06g00512 219 SUPERFAMILY RmlC-like cupins 23 214 IPR011051 -
Adu06g00512 219 ProSitePatterns Germin family signature. 104 117 IPR019780 GO:0030145
Adu06g00512 219 PANTHER GERMIN-LIKE PROTEIN 10 217 - -
Adu06g00512 219 Pfam Cupin 70 208 IPR006045 -
Adu06g00512 219 PRINTS Germin signature 109 129 IPR001929 GO:0030145
Adu06g00512 219 PRINTS Germin signature 139 159 IPR001929 GO:0030145
Adu06g00512 219 PRINTS Germin signature 172 187 IPR001929 GO:0030145
Adu06g00512 219 CDD cupin_OxOx 23 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00512 Adu-Chr6 6048689 6050223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00512 8 219 Miscellaneous Gene Families AT3G05930 58.962 1.14e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00512 - - gmx:100302722 363.229