Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00484 ATGGCTAGGAAGAAGATCAGAGAGTACCAATCCAAGAGGCTCCTCAAGGATCACCTAAGCCGACTCGCTTTCATTAACCTCGAAATTCAATCTGCTCAGGTGACGGAGTCAACGGACTTCACTGAGTTGACTAACCAACACCCATGGCTTTCCTCTACAAAATTGGTGGTCAAGCCTGACATGCTCTTCGGCAAGCGCGGTAAGAGTGGCCTCGTCGCTCTCAATTTGGACATTGCTCAAGTCGCCGATTTTGTCAAAGCACGCCTCGGCGTTGAGGTTGACATCGCTGGTTGCAAGGCACCTATCACCACTTTCATTGTTGAACCCTTTGTTCCACATGATCAAGAATTCTATCTCTCCATTGTTTCCGAACGCCTCGGCTCTGCCATCAGCTTCTCTGATTCTGGCGGCATCGAAATTGAGGAGAACTGGGATAAGGTTAAGACTATATTCCTTCCAACAGAGAAACCTATGACTCCGGAGGCGTGTGCGCCGCTGATTGCTACACTTCCTTTGGAGATTCGGGGCACAATTGGCAAATTCATAATCGGTGTGTTTGCTGTCTTTCAAGACTTGGACTTCAGTTTCCTAGAGATGAATCCATTTACACTGGTGAATGACAAGCCATATCCACTGGATATGAGAGGGGAATTGGATGACACTGCTGCATTCAAGAACTTCAACAAGTGGGGTAATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTGAGCCCCACAGAAAGCTTCATTCATTCCTTGGATGAGAAGACAAGTGCATCTTTGAAGTTTACTATATTGAACCCAAAAGGACGCATTTGGACAATGGTAGCTGGAGGCGGTGCAAGTGTTATATATGCCGATACTGTTGGAGATTTAGGTTACGCATCAGAGCTTGGAAACTATGCTGAGTATAGTGGAGCTCCAAATGAGGAGGAGGTGTTACAGTATGCAAGAGTTGTAATTGATTGTGCCACTGCTGAGCCCGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATTGCAAACTTCACTGATGTTGCCGCCACGTTTAGTGGGATTATTCGAGCCCTGAAAGAGAAGGAAACAAAGCTTAAAGCTGCAAGAATGCACATTTATGTCAGAAGAGGAGGTCCAAATTATCAGGCTGGTTTAGCGAAGATGCGTGCACTGGGGGAGGAACTGGGACTACCGATTCAGGTTTATGGACCAGAGGCTACAATGACTGGCATATTTAAGCTTGGGGCTTTTGGATCATGGATACCTTCCTCTTCACTTCTGAAGCAAGATCCAGAAAGCAAGGTTGCCTGTGAGACCTGCACAAAGACCAACTTGGTCATGGTCTTTGGAGAGATTACCACCAAAGCCAATGTGGACTATGAGAAGATTGTTCGCGACACGTGCCGCGGGATAGGCTTTGTGTCCGATGATGTTGGCCTTGATGCAGACAATTGCAATGTATTGGTTTACCTGGAGCAGCAAAGCCCTGATATTGCACAGGGTGTCCATGGCAACCTCACAAAGCGGCCGGAGGAGATTGGTGCAGGTGATCAGGGTCACATGTTTGGCTATGCCACGGACGAGACACCAGAATTTATGCCTCTCAGTCATGTCCTCGCTACCCAGCTCGGTGCTCGCCTCACCGAGGTGCGCAAGAATGGGACCTGCACTTGGTTGAGACCTGATGGGAAAACACAAGTTACTGTGGAATACTACAATGACAATGGCGCAATGGTCCCGGTCCGTGTCCACACTGTTCTGATTTCCACGCAGCATGATGAAACTGTTACCAATGATGAAATTGCTGCTGACCTCAAAGAGCATGTAATTAAGTATGTGATACCTGAGAAGTACTTGGATGAGAAGACCATTTTCCATCTCAACCCGTCTGGCCGGTTCGTGATTGGCGGCCCTCATGGTGATGCCGGCCTCACTGGGCGCAAAATCATTGTCGACACATATGGTGGTTGGGGAGCACATGGTGGCGGTGCCTTCTCTGGGAAGGACCCCACCAAGGTGGATAGGAGTGGAGCCTATATTGCTAGACAGGCTGCAAAGAGTATTGTGGCCAGTGGAATTGCAAGAAGGTGCATTGTGCAAATTTCATATGCAATTGGTGTTCCTGACCCATTATCTGTGTTTATTGACACTTATGGGACAGGGAAGGTTCCAGACAGGGAGATTCTGAAGATTGTGAAGGAGAACTTTGACTTTAGGCCTGGAATGATTTCCAATGATTTGGACCTCAAGAGGGGTGGGAATGGCAGGTTCTTGAAGACTGCTGCTTATGGACATTTTGGAAGAGATGACCCTGATTTCACATGGGAGATTGTGAAGCCTCTCCACTGGGAGAAGCCCCAAGAATAA 2367 0.4791 MARKKIREYQSKRLLKDHLSRLAFINLEIQSAQVTESTDFTELTNQHPWLSSTKLVVKPDMLFGKRGKSGLVALNLDIAQVADFVKARLGVEVDIAGCKAPITTFIVEPFVPHDQEFYLSIVSERLGSAISFSDSGGIEIEENWDKVKTIFLPTEKPMTPEACAPLIATLPLEIRGTIGKFIIGVFAVFQDLDFSFLEMNPFTLVNDKPYPLDMRGELDDTAAFKNFNKWGNIEFPLPFGRVLSPTESFIHSLDEKTSASLKFTILNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATAEPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKETKLKAARMHIYVRRGGPNYQAGLAKMRALGEELGLPIQVYGPEATMTGIFKLGAFGSWIPSSSLLKQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRGIGFVSDDVGLDADNCNVLVYLEQQSPDIAQGVHGNLTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGARLTEVRKNGTCTWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKYVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGIARRCIVQISYAIGVPDPLSVFIDTYGTGKVPDREILKIVKENFDFRPGMISNDLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEIVKPLHWEKPQE 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00484 788 Gene3D - 512 776 - -
Adu06g00484 788 Pfam S-adenosylmethionine synthetase, central domain 512 633 IPR022629 GO:0004478|GO:0006556
Adu06g00484 788 Gene3D - 1 233 - -
Adu06g00484 788 Pfam ATP-grasp domain 6 203 IPR013650 -
Adu06g00484 788 ProSitePatterns S-adenosylmethionine synthase signature 2. 661 669 IPR022631 GO:0004478|GO:0006556
Adu06g00484 788 ProSitePatterns S-adenosylmethionine synthase signature 1. 514 524 IPR022631 GO:0004478|GO:0006556
Adu06g00484 788 CDD S-AdoMet_synt 426 776 - -
Adu06g00484 788 Pfam S-adenosylmethionine synthetase, N-terminal domain 426 496 IPR022628 GO:0004478|GO:0006556
Adu06g00484 788 Gene3D - 535 637 - -
Adu06g00484 788 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Adu06g00484 788 Pfam S-adenosylmethionine synthetase, C-terminal domain 635 776 IPR022630 GO:0004478|GO:0006556
Adu06g00484 788 Gene3D - 426 674 - -
Adu06g00484 788 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Adu06g00484 788 SUPERFAMILY S-adenosylmethionine synthetase 426 505 IPR022636 GO:0004478|GO:0006556
Adu06g00484 788 TIGRFAM metK: methionine adenosyltransferase 426 780 IPR002133 GO:0004478|GO:0005524|GO:0006556
Adu06g00484 788 SUPERFAMILY S-adenosylmethionine synthetase 510 634 IPR022636 GO:0004478|GO:0006556
Adu06g00484 788 PANTHER ATP-CITRATE SYNTHASE 1 413 - -
Adu06g00484 788 Pfam ATP citrate lyase citrate-binding 241 414 IPR032263 -
Adu06g00484 788 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 413 - -
Adu06g00484 788 Gene3D - 240 424 IPR016102 -
Adu06g00484 788 SUPERFAMILY S-adenosylmethionine synthetase 635 783 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00484 Adu-Chr6 5762347 5769854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00484 1 413 Acyl Lipid Metabolism Gene Families AT1G09430 86.925 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00484 K01648 - gmx:100787551 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g02987 01 100684699 100686858 Adu06g00484 06 5762347 5769854 ECH
Adu06g00484 06 5762347 5769854 Adu06g00484 06 5762347 5769854 ECH