Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00480 ATGGGGTCCGAAGGTCCTCCATCAGCAAAGATAACAACAATTCATGTGACAGGATTTAAAAAGTTCCATGGGGTTTTAGAGAATCCAACAGAAATAATTGTCAATAATTTGACAGAATATATGAACAAGAAGACTTTGCCAAAATGTTTAACTATTGGGAGCTGCACCATTCTTGAGACCGCAGGTGAAGGAGCACTTGTTCCACTCTACCAGACCTTACAATCTGCCCTTATTGTTCCACAAGACTCTCAATCTGAATCTTCAAATTCCAACCGAATTATTTGGCTTCATTTTGGGGTTAATAGTGGTGCAACAAGGTTTGCTATAGAGAAGCAAGCTTTCAATGAAGCTAATTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAGAGTCCCAATTGTTCCTTCAGATGGTGAAATTTCACGAACACGTCAGACTTCGCTTCCTGTTGTGGAGATCACCAAGGCATTGGCACAGAAGGAATATGATGTTATCCTATCGGATGATGCAGGCAGGTTTGTATGCAATTATGTTTACTACCATTCCCTTCGTTTTGCAGAGCAGAACGGGATTAAATCTCTTTTTGTTCATGTGCCACTCTTCTCAACAATAAATGAAGAAACTCAAATGCAATTTGCTTCTTCCTTGTTAGAGGTACTTGCTTCTATATGTTAA 678 0.4027 MGSEGPPSAKITTIHVTGFKKFHGVLENPTEIIVNNLTEYMNKKTLPKCLTIGSCTILETAGEGALVPLYQTLQSALIVPQDSQSESSNSNRIIWLHFGVNSGATRFAIEKQAFNEANFRCPDEMGWKPQRVPIVPSDGEISRTRQTSLPVVEITKALAQKEYDVILSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFSTINEETQMQFASSLLEVLASIC 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00480 225 PANTHER BNAA09G15240D PROTEIN 1 224 - -
Adu06g00480 225 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 224 IPR016125 -
Adu06g00480 225 CDD Peptidase_C15 13 223 IPR000816 GO:0005829|GO:0006508|GO:0016920
Adu06g00480 225 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 13 223 IPR036440 -
Adu06g00480 225 PIRSF Pyrrolidone-crbxlat_pptds 11 225 IPR000816 GO:0005829|GO:0006508|GO:0016920
Adu06g00480 225 Gene3D - 10 224 IPR036440 -
Adu06g00480 225 Pfam Pyroglutamyl peptidase 93 203 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00480 Adu-Chr6 5732278 5735582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00480 K01304 - gmx:100789152 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00480 06 5732278 5735582 Adu06g00480 06 5732278 5735582 ECH
Adu06g00480 06 5732278 5735582 Adu09g01130 09 22327183 22330343 PCT