Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00249 ATGGCTGTGCCCGTTGAGGAAGCCATTGCAGCTCTTTCCACATTCTCGCTTGATGACGAGCAACCGGAGGTGCAAGGACCTGGAGTGTGGGTGTCAACTGAGAGAGGTGCAACAGATAGTCCAATAGAGTATAGCGATGTTTCTGCATACCGATTATCTCTATCAGAGGATACGAAAGCTCTCAATCAGCTGAACATCCTTACCCAAGAGGGGAAGGAAATGGCATCAGTGCTTTACACATATCGCAGTTGTGTCAAAGCCCTTCCGCAGCTTCCTGATTCGATGAAGCAAAGTCAAGCTGATTTATATTTGGAAACATATCAAGTTCTGGACTTGGAAATGAGTCGGTTGCGTGAAATTCAGCGATGGCAAGCATCAGCTTCATCAAAGTTAGCTGCTGATATGCAACGTTTTTCTCGGCCTGAGCGACGCATTAATGGCCCTACAATATCTCATTTGTGGTCTATGTTGAAGTTACTTGATGTTTTGGTGCAACTTGATCATCTTAAAAATGCTAAGGCAAGCATACCTAATGACTTTTCTTGGTATAAAAGAACTTTCACACAAGTCAGCGGTCAGTGGCAAGACACTGATTCAATGAGGGAAGAGTTGGATGATTTACAGATTTTCTTGAGCACAAGATGGGCTATCTTGTTGAACCTGCATGTTGAGATGTTCCGTGTGAACAATGTGGAAGACATTCTTCAAGTACTTATAGTCTTTGTTGTAGAGTCTCTGGAGTTGGACTTTGCACTTCTCTTTCCAGAGCGCCACATACTCTTGCGTGTCTTGCCTGTTCTTGTAGTCCTAGTGACATCATCAGAGAAAGATAGCGAGTCTCTGTACAAGAGGGTGAAAATCAACAGACTGATCAATATATTTAAGAATGATGTGGTCATTCCTGCATTTCCAGATCTGCATCTGTCTCCTGCTGCAATTTTGAAGGAATTATCAACATATTTTCCAAAATTTTCTTCCCAAACTCGACTTCTTACCCTTCCAGCACCTCATGAACTTCCACCTCGTGAGGCACAAGAATATCAGAGACATTATCTGATCATCAATCATATTGGAGCAATTCGTGCTGAGCATGATGATTTCACAATTCGTTTTGCTTCAGCAATGAATCAGCTTTTGTTGTTGAAGTCAACTGATGGCTCTGATGTTGATTGGAGCAAAGAAGTAAAGGGTAACATGTATGATATGATTGTTGAAGGTTTTCAGCTATTAAGCAGATGGACTGCACGCATCTGGGAACAATGTGCTTGGAAGTTTTCTCGACCATGCAAGGATGCATCCCCATCATTCTCAGACTATGAAAAGGTTGTACGATATAATTACACTGCAGAAGAAAGGAGAGGACTGGTTGAACTTGTAAGCTACATAAAGAGTGTTGGATCTATGATGCAGCGGTGTGACACACTGGTTGCTGAGGCTTTATGGGAAACAATACATGCTGAGGTTCAAGACTTCGTCCAAAACACATTAGCTTCTATGTTACGGACTACTTTTAGAAAGAAGAAGGACCTGTCTAGGATTCTTTCGGATATGAGGACCCTTTCAGCTGATTGGATGGCTAATACAAACAAGTCTGAATCCGAGTTACAGTCCTCACACCATGGAGGTGAAGAAAGTAGAGCAAACATATTTTATCCAAGGGCAGTTGCCCCTACCGCCGCTCAGGTGCACTGCTTGCAATTCTTAATATATGAGGTGGTTTCTGGTGGTAACCTACGGAGGCCTGGCGGACTCTTTGGTAACAGTGGCTCAGAAATTCCAGTTAATGATTTAAAACAGCTGGAGACTTTTTTTTACAAGCTTGGTTTTTTCCTTCATATTTTGGACTACTCAGTGACAGTTGCAACATTGACAGATCTTGGTTTCTTATGGTTTAGGGAATTTTATTTAGAGTCTTCGCGAGTAATTCAGTTTCCAATTGAATGTTCTCTTCCATGGATGTTGGTGGATTGTGTCCTTGAATCACCAAATTCTGGTCTTCTTGAGAGTGTTTTGATTCCACTAGATATCTATAATGATTCAGCTCAGCAAGCATTGGTGTTGCTGAAGCAACGATTTCTGTATGATGAAATTGAAGCTGAGGTGGATCATTGTTTTGATATATTTGTTTCGAAATTGTGTGAAACCATTTTCACATATTACAAAAGTTGGGCAGCAAGTGAATTGCTTGATCCTTCCTTCCTCTTTGCCTCAGACAATGCAGAAAAGTATTCTGTGCAGCCTATAAGGCTCAATATGCTGTTGAAAATGACTAGAGTGAAGTTGCTCGGAAGGATGATTAATTTGCGAAGTTTGATCACCGAACGGATGAACAAAGTTTTCCGTGAAAATATTGAGTTTCTGTTTGATCGATTTGAGTGTCAGGATCTGTGTGCCATAGTGGAAGTAGAGAAGCTACTGGATATCCTAAAACATTCACACGAACTACTGTCGAGAGACCTTTCTGTTGACTCTTTCAGTTTGATGTTGAATGAGATGCAGGAAAACATTTCTCTTGTTTCATTTTCTAGCCGACTGGCCTCACAGATTTGGTCTGAGATGCAAAGTGATTTTTTGCCAAATTTCATCCTCTGCAACACCACTCAACGTTTTATCAGATCATCAAAGGCTGTTCCTGTTCAAAAGCCATCCATACCTTCTGCTAAGCCTAGTTTCTATTGTGGTACTCAAGATTTGAATTCTGCTCATCAAAGTTTTGCACGATTGCATAGTGGATTCTTTGGAATGCCTCACATGTTTTCTATTGTTCGACTTCTGGGATCCCGATCATTACCTTGGCTTATTAGGGCCCTTCTTGATCACATATCAAACAAGATAACTTTGCTTGAACCAATGATCACAGGGTTACAAGAATCCTTACCTAAATCAATTGGACTTCTGCCTTTTGATGGAGGTGTGACAGGGTGTGTCAGACTTGTGAAAGAACATCTTAATTGGGAGACAAAATCAGAGCTGAAAGCCGAGGTTCTTCATGGCATAAAAGAGATTGGAAGTGTACTATACTGGATGGGGCTTCTAGATATTGTATTGAGAGAAATAGATACTAAGAATTTCATGCAAACTGCTCCTTGGCTGGGCTTACTTCCTGGAGCCGATGGACAAATATTAACTACTCAAGATAGTGGTGACAGCCCTGTTGTTAGTCTCTTTAAATCAACTGCTGCTGCGATGGTTTCATATCCTGGTTGCCCTTCTCCTACCTCTTTCCACATCATGTCAAAGCAAGCAGAAGCAGCAGATCTTTTATACAAAGCTAACTTGAATACTGGAAGTGTCCTGGAGTATGCATTAGCTTTCACCAGTGCTGCATTAGATAAATATTGTAGTAAATGGAGTGCTGCGCCCAAGACAGGCTTCATTGATATTACAATTTCTAAAGATTTCTACAGAATATACAGTGGTCTCCAAATTGGATACTTGGAAGAGTCTGCAGAAGTGTCATCAAATAGTCATGAAAGGCTAGGAGATTCAGTTGCTTGGGGTGGATGCACTATAATATATTTGCTTGGGCAACAGCTACATTTCGAGCTCTTTGACTTTTCATATCAGATACTCAATATTGCAGAAGTAGAGGCTGCATCTGTCATACAAACACATAAGAACTCACACTTTGCTATGCAGGGATGGGAAGTCTTATTGGAAGCAATGAAAAAGGCAAGGAGATTAAATAACCATGTATTCTCCATGCTTAAAGCACGCTGTCCGCTTGAAGAAAAGACAGCCTGCGCTATTAAGCAAAGTGGTGCTCCATTGCATCGCATAAAATTTGAGAACACAGTATCTGCGTTTGAAACACTGCCGCAGAAAGGTTCATAA 3834 0.4116 MAVPVEEAIAALSTFSLDDEQPEVQGPGVWVSTERGATDSPIEYSDVSAYRLSLSEDTKALNQLNILTQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREIQRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLINIFKNDVVIPAFPDLHLSPAAILKELSTYFPKFSSQTRLLTLPAPHELPPREAQEYQRHYLIINHIGAIRAEHDDFTIRFASAMNQLLLLKSTDGSDVDWSKEVKGNMYDMIVEGFQLLSRWTARIWEQCAWKFSRPCKDASPSFSDYEKVVRYNYTAEERRGLVELVSYIKSVGSMMQRCDTLVAEALWETIHAEVQDFVQNTLASMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSHHGGEESRANIFYPRAVAPTAAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQLETFFYKLGFFLHILDYSVTVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDCVLESPNSGLLESVLIPLDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVSKLCETIFTYYKSWAASELLDPSFLFASDNAEKYSVQPIRLNMLLKMTRVKLLGRMINLRSLITERMNKVFRENIEFLFDRFECQDLCAIVEVEKLLDILKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMQSDFLPNFILCNTTQRFIRSSKAVPVQKPSIPSAKPSFYCGTQDLNSAHQSFARLHSGFFGMPHMFSIVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQESLPKSIGLLPFDGGVTGCVRLVKEHLNWETKSELKAEVLHGIKEIGSVLYWMGLLDIVLREIDTKNFMQTAPWLGLLPGADGQILTTQDSGDSPVVSLFKSTAAAMVSYPGCPSPTSFHIMSKQAEAADLLYKANLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITISKDFYRIYSGLQIGYLEESAEVSSNSHERLGDSVAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAASVIQTHKNSHFAMQGWEVLLEAMKKARRLNNHVFSMLKARCPLEEKTACAIKQSGAPLHRIKFENTVSAFETLPQKGS 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00249 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 134 163 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 257 272 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 436 454 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 623 641 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 690 712 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 748 778 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 1133 1149 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN 2 11 1249 - -
Adu06g00249 1277 PIRSF CYFIP 1 1277 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 Pfam Cytoplasmic Fragile-X interacting family 399 1236 IPR008081 GO:0030833|GO:0031267
Adu06g00249 1277 Pfam CYRIA/CYRIB Rac1 binding domain 156 218 IPR009828 GO:0031267
Adu06g00249 1277 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED 11 1249 IPR008081 GO:0030833|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00249 Adu-Chr6 3012248 3031325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00249 K05749 - gmx:100775991 2449.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00249 06 3012248 3031325 Adu06g00249 06 3012248 3031325 ECH