Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00239 ATGGCAATCTTGACTGCAAATTCAATGTTATTATCTTGTCACGAATCCACAGTCATAACTAATGTACCATTGATAATGAAGTTAGGTCAAATAAGGTTTCACAGAACAGTAGGTTTTCACTCCAGTAGTCTTGTTTTCAGACTATTCTCTACTACCACAAATCGAACTACACGCTTCAAATCCTTAGTATCTTTTAGAAATCAATCTCTCACTATCAAAGCCAAACTCCATCATCATTCCTCCTCTCATACTAATCGCCCATCGATGTTGACGAACAGAATACTTGAATTCATGGGAAACTGTAGATATTTACGCACATTGGAAGTGGCTAGTATTTTGGCCTGGTTTCTAGTAATTGTTCCTTCAGTTGATGCTGTTGACGCTCTCAAAACTTGTACTTGCTTATTGAAGGAATGCAGGATAGAACTAGTTAGGTGTCTCTCAAATCCATCATGTGCAGCCAATGTTGCTTGCCTCCAAACTTGTAATAATAGACCTGATGAGACAGAATGCCAAATCAAATGCGGAGACCTGTTTGAGAACAGTGTAGTTGATGAATTCAATGAGTGTGCTGTGTCACGGAAGAAATGTGTGCCTATGAAATCAGATGTGGGAGAATTTCCTGCTCCAAATCCTGATATCCTTGTTCAAAACTTTAACATTGCAGATTTTACTGGCAAGTGGTTCATCAGTAGTGGTTTAAATCCAAGTTTTGATACTTTTGATTGTCAATTACACGAATTTCACACAGAAGACAACAAACTTGTGGGGAATTTATCATGGAGAGTAAAAACTCCAGATGCTGGATTTCTTACTAGGTCAACCCAGCAGAGATTTGTACAAGATCCCAAATACCCTGGCATCCTCTATAATCATGATAATGAGTACCTTCACTATCAAGATGACTGGTACATTTTGTCATCAAAGATTGAAAATAAGTCGGAAGACTATGTTTTTGTATACTATCGAGGTAAAAACGATGCATGGGATGGATATGGAGGTGCTGTTGTGTACACAAGAAGTAAAACTTTACCAGAATCTATAGTGCCTGAACTCGAAAGAGCTGCGAAGAAAGTAGGAAGGGACTTTAGCAAGTTTATCAAAACAGACAATACTTGTGGGCCAGAGCCTTCCCTAGTGGAAAGACTGGAGAAAAAGGTGGAGGAAGGAGAAGAAACTATTGCTAGAGAAGTCGAGGAGTTAGAAGGAGAAGTAGAGAAGGTGCGAAAAACTGAAATGACATTATTTCAGAGGTTGGCTGAAGGGTTCAAAGTGCTTCAAGAGGATGAGCAAAATTTCTTAAAAGGCTTGTCTAAAGAGGAGATGGAAATACTTGACGGACTCAAAATGGAAGCTACTGAAGTAGAAAAGCTCTTTGGAGGTGCTTTGCCTTTGCGAAAACTAAGGTAG 1410 0.3908 MAILTANSMLLSCHESTVITNVPLIMKLGQIRFHRTVGFHSSSLVFRLFSTTTNRTTRFKSLVSFRNQSLTIKAKLHHHSSSHTNRPSMLTNRILEFMGNCRYLRTLEVASILAWFLVIVPSVDAVDALKTCTCLLKECRIELVRCLSNPSCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDVGEFPAPNPDILVQNFNIADFTGKWFISSGLNPSFDTFDCQLHEFHTEDNKLVGNLSWRVKTPDAGFLTRSTQQRFVQDPKYPGILYNHDNEYLHYQDDWYILSSKIENKSEDYVFVYYRGKNDAWDGYGGAVVYTRSKTLPESIVPELERAAKKVGRDFSKFIKTDNTCGPEPSLVERLEKKVEEGEETIAREVEELEGEVEKVRKTEMTLFQRLAEGFKVLQEDEQNFLKGLSKEEMEILDGLKMEATEVEKLFGGALPLRKLR 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00239 469 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC 38 469 - -
Adu06g00239 469 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 38 469 IPR044682 GO:0010028|GO:0046422
Adu06g00239 469 CDD lipocalin_VDE 203 377 - -
Adu06g00239 469 Pfam VDE lipocalin domain 131 371 IPR010788 GO:0046422
Adu06g00239 469 Coils Coil 380 411 - -
Adu06g00239 469 Gene3D - 202 383 IPR012674 -
Adu06g00239 469 SUPERFAMILY Lipocalins 208 377 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00239 K09839 - gmx:100816085 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00239 06 2891556 2893597 Adu06g00239 06 2891556 2893597 ECH