Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00233 ATGGCTACTCATTCTTTAGCATTAACTAATGCTTCTCAGACTGTAGCAGAACAACCGTTAATCATTAGGCAAGAACAACCATTAGTCATTGGGCAAGAGTTTCCAGATGTAGAAACTTGCCGAAGAACATTGAAAGATATTGCCATAGCTATGCATTTTGACCTTCGGATAGTTAAGTCAGATCGCAGTCGTTTTATAGCAAAATGCTCCAAAGAAGGGTGTCCATGGCGTGTTCATGTTGCAAAATGTCCTGGGGTTTCTACTTTTACTATTAGAACCCTACATGGAGACCATACTTGTGAGGGAGTTCGCAACCTTCATCATCAGCAGGCATCAGTAGGTTGGGTTGCAAGATCTGTAGAAGCGCGCATACGAGACAATCCACAATACAAGCCAAGGGAAATACTGCAAGATATCCGTGATCAGCATGGAGTTGCTGTTTCTTACATGCAAGCTTGGCGTGGGAAGGAGCGGAGCATGGCTGCACTTCATGGAACATTTGAAGAAGGTTATCGTCTTCTCCCTGCATACTGTGAGCAAATAAGGAAAACCAACCCTGGTAGCATTGCATCTGTTGTTGCCACTGGACAAGAAAACTGTTTTCAGCGCCTGTTTATTTCTTACCGTGCATCAATTTATGGGTTTATAAATGCTTGTAGGCCACTTTTAGAGCTTGACAGAGCACATCTTAAAGGGAAGTTCTTGGGTTCATTGCTTTGTGCTGCTGCTGTTGATGCTGATGATGCATTGTTTCCCTTGGCCATTGCTATTGTTGATACTGAAAGTGATGAAAACTGGATGTGGTTCATGTCGGAATTGCGAAAGCTTCTTGGAGTAAACACTGACAACATGCCTAGACTGACAATATTATCTGAAAGGCAAAGAGGCATTGTGGAGGCTGTAGAAACACATTTTCCCACTGCTTCCCATGGTTTCTGTCTACGCTATGTTAGCGAAAATTTTCGCGATACATTCAAAAATACAAAGTTGGTGAATATCTTCTGGAATGCTGTCTATGCCCTTACAGCTGCTGAATTTGAAAGCAAGATTAGTGAGATGATAGAAATCTCGCAGGATGTTATACCTTGGTTTCAACACTTTCCTCCCCATCTTTGGGCTGTGGCATACTTTGAGGGTGTTCGATATGGCCATTTTACTCTTGGGGTAACTGAATTGCTGTACAACTGGGCCCTTGAATGTCATGAGCTTCCTATAGTGCAGATGATGGAACACATCCGGCAGCAGATGGTGTCTTGGTTTAATGATCGGCAAGATACGGGCATGAGGTATACATCAATCCTTGTACCCTCGGCTGAGAAGCGGATTATGGAAGCAATTGCTGATGCTCATTGCTATCAAGTACTCCGGGCAAATGAAGTTGAGTTTGAGATTGTCTCAACTGAGAGGACCAACATTGTGGATATAAGAAGCCGTGAGTGTTCTTGTCGTCGATGGCAGCTTTATGGTTTACCTTGTGCCCATGCTGCTGCTGCCCTTATATCTTGTGGACACAATGCCCATATGTTTGCCGAACCATGCTTCACTGTACAAAGTTACAGAATGACCTATTCACAGACAATAAATCCCATTCCAGATAAGAGTGAATGGAGAGAACTTGGGGAAGGAGCAGAAGGTGGAGGTGCAAGGGTTGATATTATGATTCGCCCACCAAAGACTCGCCGACCACCTGGAAGGCCAAAAAAGAAGGTTCTACGAGTGGAGAACTTTAAGCGACCCAAAAGGGTAGTTCAATGTGGTCGCTGCCATATGTTAGGACACTCTCAAAAGAAGTGCACAATGCCCATTTGA 1809 0.4389 MATHSLALTNASQTVAEQPLIIRQEQPLVIGQEFPDVETCRRTLKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVSTFTIRTLHGDHTCEGVRNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQHGVAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSIASVVATGQENCFQRLFISYRASIYGFINACRPLLELDRAHLKGKFLGSLLCAAAVDADDALFPLAIAIVDTESDENWMWFMSELRKLLGVNTDNMPRLTILSERQRGIVEAVETHFPTASHGFCLRYVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKISEMIEISQDVIPWFQHFPPHLWAVAYFEGVRYGHFTLGVTELLYNWALECHELPIVQMMEHIRQQMVSWFNDRQDTGMRYTSILVPSAEKRIMEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRECSCRRWQLYGLPCAHAAAALISCGHNAHMFAEPCFTVQSYRMTYSQTINPIPDKSEWRELGEGAEGGGARVDIMIRPPKTRRPPGRPKKKVLRVENFKRPKRVVQCGRCHMLGHSQKKCTMPI 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00233 602 Pfam SWIM zinc finger 469 502 IPR007527 GO:0008270
Adu06g00233 602 SMART 26again6 478 505 IPR006564 GO:0008270
Adu06g00233 602 Pfam MuDR family transposase 28 91 IPR004332 -
Adu06g00233 602 PANTHER MUDR FAMILY TRANSPOSASE ISOFORM 1 9 600 - -
Adu06g00233 602 ProSiteProfiles Zinc finger SWIM-type profile. 462 503 IPR007527 GO:0008270
Adu06g00233 602 Pfam MULE transposase domain 223 320 IPR018289 -
Adu06g00233 602 PANTHER POLYPROTEIN, PUTATIVE-RELATED 9 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00233 Adu-Chr6 2842785 2844593 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00233 - - lang:109340397 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00233 06 2842785 2844593 Adu06g00233 06 2842785 2844593 ECH