Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00096 ATGGACAAGTTGAATCTTTCTCAACTGGGCGAGAAGCTCATGACGAGTGGGGCCCAAATGGGGCGAATCATGAGCGTCAAGATGAAGGAGGTGAAGGAGATGCTCCAGGCACCCACACCCGAATCCAAGATGGTCGAAGACGCCACCTCCGAAACCCTATCGGACCCTAATTGGGGCACTAACCTCAGGATCTGTGCCATGATCAATTCCGACCAACTCAACGGCTCTGAGGTTGTTAGGGCCATCAAGAGGAGACTCTCTCACAAGAACCCACTCGTTCACTCACTCACCCTTGACCTTCTCGAAGCTTCCGCCATGAACTGCGACAAAGTCTTCTCCGAGATCGCATCCGAGAAGCTTCTCGATGAAATGATCTCCAAGCTCCTTGATAACCCTCACGCTGATCCCAATGTTCGTCGGAGGGCGTTTCACCTCATTAGGGCTTGGGGCCAGTCTCAGGATCTCGCTTATCTCCCTGTCTTTCGTCAAACTTACATGAGTTTGCAAGAAAGGGCTGAATCAGTTGATGTAGGAGGAGGAAGTTCGCCCGGTGTTCCTCACAATTTAGGGTCTTATCTTCAACAACAGGGATTAGACCCTCCTTCAAGCTACCCTGTTCCCGAAGCTGGACTAGTTTCTATGGATGACTTGGCTTTTTCTTCCGGTCTCCAACACATGTCAGCTGAAGAGAAGAAAGAGCTTCTTGTAGTTGCACGAAACAGTCTTGAATTGCTATCTAGCATAATAAATTCTGAGGCAGAGCCCAAAACCTTGAAGGAAGATTTAACTCTCAGTTTGCTGGACAAGTGCAAGCACTCACTTTCTATCATGAAGGAAATTGCGGAAAGCACCACAGATGATGAAGAGACACTTTTTGAGGCTTTGTATCTTAATGATGAGCTGCAGCAGATAGTTTCCAAGTACGAGGAGTTGGAGGCTGCTCAACGGTCTGTGGCACAAGAGACTCCAAATGCTGACACTGCAAAGCATGATGCGGAAGCTGTTCAAAATCCTATTGAACTTCCTAAAAGATTTGAAGAGGATGAGTCCGAAGAGTTCGAAGCTGCTCAGGAACTTGAAAGAAAGCTTCCCAAAAAGTCCAACGGTGTTGAAGCCAATGCAACCAATGGGGATGGTCATCATGTTGAAACCACAATACTAGATGAGGCAGATGAGAAGGGCAACGCCGAATCTAGCCTCAAGAGCAATAGAGAGTGA 1218 0.4787 MDKLNLSQLGEKLMTSGAQMGRIMSVKMKEVKEMLQAPTPESKMVEDATSETLSDPNWGTNLRICAMINSDQLNGSEVVRAIKRRLSHKNPLVHSLTLDLLEASAMNCDKVFSEIASEKLLDEMISKLLDNPHADPNVRRRAFHLIRAWGQSQDLAYLPVFRQTYMSLQERAESVDVGGGSSPGVPHNLGSYLQQQGLDPPSSYPVPEAGLVSMDDLAFSSGLQHMSAEEKKELLVVARNSLELLSSIINSEAEPKTLKEDLTLSLLDKCKHSLSIMKEIAESTTDDEETLFEALYLNDELQQIVSKYEELEAAQRSVAQETPNADTAKHDAEAVQNPIELPKRFEEDESEEFEAAQELERKLPKKSNGVEANATNGDGHHVETTILDEADEKGNAESSLKSNRE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00096 405 Gene3D - 229 326 IPR038425 -
Adu06g00096 405 PANTHER TOM1-LIKE PROTEIN 2 1 359 - -
Adu06g00096 405 ProSiteProfiles GAT domain profile. 226 313 IPR004152 GO:0035091|GO:0043130
Adu06g00096 405 PANTHER TOM1-LIKE PROTEIN 1 1 359 IPR044836 GO:0035091|GO:0043130|GO:0043328
Adu06g00096 405 Pfam GAT domain 239 312 IPR004152 GO:0035091|GO:0043130
Adu06g00096 405 MobiDBLite consensus disorder prediction 315 405 - -
Adu06g00096 405 Coils Coil 301 321 - -
Adu06g00096 405 SMART VHS_2 41 172 IPR002014 GO:0035091|GO:0043130
Adu06g00096 405 MobiDBLite consensus disorder prediction 382 405 - -
Adu06g00096 405 CDD VHS 42 168 - -
Adu06g00096 405 SUPERFAMILY ENTH/VHS domain 37 170 IPR008942 -
Adu06g00096 405 Pfam VHS domain 42 152 IPR002014 GO:0035091|GO:0043130
Adu06g00096 405 SUPERFAMILY GAT-like domain 201 312 - -
Adu06g00096 405 ProSiteProfiles VHS domain profile. 48 176 IPR002014 GO:0035091|GO:0043130
Adu06g00096 405 MobiDBLite consensus disorder prediction 336 367 - -
Adu06g00096 405 Gene3D - 32 177 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00096 Adu-Chr6 1252860 1254902 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00096 - - gmx:100803803 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00096 06 1252860 1254902 Adu06g00096 06 1252860 1254902 ECH