Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00050 ATGGAGGACGAAGCTGACATATACGACGGCGTTAGGGCTCAGTTTCCTCTCAGCTTCGGCAAGCAATCCAAGTCTCAGACCCCTCTCGAAGCCATCCACAACGCCACGCGTCGATCTAATACCAATCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCGAAGCCTGCAACCGCAAGCGCTCTTCCTTCTCTCTCTTCTTCTTCTAAGGAATGGCTCAATTCCCTACGCTCCTCTAAAAACCCTACCCCTACTCTTGCTGATCGTGGTGGCGGTTCTGAGATTGGCCCGCCGCCACCTCCGCCTCCGACGGCAGAGGATGATAACGACGATGGCGCCATGGTGGGGCCGCCTCCCCCTCCACCTCCGGGGGTGGGTTCGGGGGCGGATGAGGACGAAGACGACGATATGATTGGGCCGCCCCCGCCGCCGTCTGGTAACAATTTGAGCTCCGACGACGACGATGATTCCAATGGAGATGAGTTGGGGAACCGGTTCCGTATTCCACTTAGCAACGAGATTGTCCTCAAGGGCCACACCAAGGTTGTGTCAGCTCTTGCTGTAGATCACACTGGATCTAGAGTGCTTTCTGGAAGTTATGACTACTCAGTGCGGATGTACGATTTTCAAGGAATGAATGCTCGTTTGCAATCGTTTCGACAACTGGAGCCCGCTGAAGGTCATCAAGTTCGCAACTTAAGCTGGAGTCCAACAGCAGATCGGTTTTTGTGTGTGACTGGATCAGCTCAAGCAAAGATTTATGATCGCGATGGGCTTACTTTGGGAGAGTTTATGAAGGGAGACATGTATATTCGTGATCTAAAGAATACCAAGGGCCACATATCTGGATTGACATGTGGAGAGTGGCATCCAAAAACTAAAGAGACAATCTTAACATCATCAGAGGATGGATCACTGCGAATATGGGATGTAAATGACTTCAAAAGCCAGAAGCAGGTAATTAAACCAAAGCTTGCAAGGCCTGGAAGAGTTCCTGTAACCACATGTGCATGGGACCATGATGGTAAACGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAGCATTAAGCCTGGGTGGGGGAGTAGGCCAGATATACATATTGAAAAGAGTCATTCAGATGATATTACTGGTCTGAAATTTTCTAGTGATGGGAATATCCTATTGTCAAGAAGCTTTGATGGTTCACTGAAGGTTTGGGATATGCGTAAAACAAAGGAAGCATTGAAGGTATTTGAGGATCTTCCAAATAATTACGGACAAACAAATATTGCATTCAGTCCTGGTGAGAATCTATTTTTTACTGGAACATCTGTTGAAAGAGAGAGCACAGTTGGGGGTTTATTGTGCTTCTTTGATAGAGCAAACCTTGAACTTGTTTCAAGAGTTGGCATATCCCCCTCTTGTAGTGTTGTTCGGTGTTGTTGGCATCCTAAACTGAATCAGATCTTTGCAACGGTTGGTGATAAAAACCAAGGAGGGACTCACATACTATATGATCCCACCATCAGTGAAAGAGGAGCCCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCAATCGACGATTTTGAGGCAAAGCCTGTCATTCACAATCCCCATGCGTTACCACTGTTTAGAGATCAGCCAAGCCGTAAGCGTCAACGGGAGAAAGTATTAAAGGATCCATTGAAGTCCCACAAGCCTGAACTTCCCATAACAGGACCTGGCTTTGGTGGACGGGTCGGTGCAAGTCAAGGAAGCTTACTAACCCAGTATCTTATGAAGCAAGGAGGTATGATCAAGGAGACATGGATGGAGGAGGATCCAAGGGAAGCCATCTTGAAATATGCTGACGCAGCAGCAAAAGATCCAAAATTCATTGCTCCAGCATATGCAGATACTCAACCCGAGCCAGTGTTCGCAAAGTCGGATTCTGAGGAAGAAGAAAAATGA 1953 0.4741 MEDEADIYDGVRAQFPLSFGKQSKSQTPLEAIHNATRRSNTNPPPPPPPPSSSSSSSKPATASALPSLSSSSKEWLNSLRSSKNPTPTLADRGGGSEIGPPPPPPPTAEDDNDDGAMVGPPPPPPPGVGSGADEDEDDDMIGPPPPPSGNNLSSDDDDDSNGDELGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYSVRMYDFQGMNARLQSFRQLEPAEGHQVRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDHDGKRIAGGIGDGSIQVWSIKPGWGSRPDIHIEKSHSDDITGLKFSSDGNILLSRSFDGSLKVWDMRKTKEALKVFEDLPNNYGQTNIAFSPGENLFFTGTSVERESTVGGLLCFFDRANLELVSRVGISPSCSVVRCCWHPKLNQIFATVGDKNQGGTHILYDPTISERGALVCVARAPRKKSIDDFEAKPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPELPITGPGFGGRVGASQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADAAAKDPKFIAPAYADTQPEPVFAKSDSEEEEK 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00050 650 ProSiteProfiles Trp-Asp (WD) repeats profile. 336 363 IPR001680 GO:0005515
Adu06g00050 650 Gene3D - 270 507 IPR015943 GO:0005515
Adu06g00050 650 PRINTS G protein beta WD-40 repeat signature 300 314 IPR020472 -
Adu06g00050 650 PRINTS G protein beta WD-40 repeat signature 348 362 IPR020472 -
Adu06g00050 650 PRINTS G protein beta WD-40 repeat signature 394 408 IPR020472 -
Adu06g00050 650 ProSiteProfiles Trp-Asp (WD) repeats profile. 280 322 IPR001680 GO:0005515
Adu06g00050 650 Pfam WD domain, G-beta repeat 335 361 IPR001680 GO:0005515
Adu06g00050 650 Pfam WD domain, G-beta repeat 177 211 IPR001680 GO:0005515
Adu06g00050 650 Pfam WD domain, G-beta repeat 375 407 IPR001680 GO:0005515
Adu06g00050 650 Pfam WD domain, G-beta repeat 278 313 IPR001680 GO:0005515
Adu06g00050 650 ProSitePatterns Trp-Asp (WD) repeats signature. 300 314 IPR019775 -
Adu06g00050 650 MobiDBLite consensus disorder prediction 548 567 - -
Adu06g00050 650 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 280 315 - -
Adu06g00050 650 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 3 650 - -
Adu06g00050 650 ProSiteProfiles Trp-Asp (WD) repeats profile. 375 416 IPR001680 GO:0005515
Adu06g00050 650 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 179 213 - -
Adu06g00050 650 CDD WD40 178 496 - -
Adu06g00050 650 MobiDBLite consensus disorder prediction 40 54 - -
Adu06g00050 650 SMART WD40_4 270 313 IPR001680 GO:0005515
Adu06g00050 650 SMART WD40_4 368 407 IPR001680 GO:0005515
Adu06g00050 650 SMART WD40_4 218 258 IPR001680 GO:0005515
Adu06g00050 650 SMART WD40_4 317 361 IPR001680 GO:0005515
Adu06g00050 650 SMART WD40_4 172 211 IPR001680 GO:0005515
Adu06g00050 650 MobiDBLite consensus disorder prediction 629 650 - -
Adu06g00050 650 SUPERFAMILY WD40 repeat-like 166 496 IPR036322 GO:0005515
Adu06g00050 650 MobiDBLite consensus disorder prediction 18 39 - -
Adu06g00050 650 ProSiteProfiles Trp-Asp (WD) repeats profile. 179 220 IPR001680 GO:0005515
Adu06g00050 650 MobiDBLite consensus disorder prediction 55 89 - -
Adu06g00050 650 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 375 409 - -
Adu06g00050 650 MobiDBLite consensus disorder prediction 548 578 - -
Adu06g00050 650 Gene3D - 172 269 IPR015943 GO:0005515
Adu06g00050 650 MobiDBLite consensus disorder prediction 1 167 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00050 282 480 Miscellaneous Gene Families AT5G08390 24.000 1.79e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00050 K24752 - gmx:100815380 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00050 06 663758 667286 Adu06g00050 06 663758 667286 ECH