Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00047 ATGGATACAAAAGAAGAGGCTGAACCTCTTGAAGATAAGGCCTCATCCCCAATTTTGCAGAAGATATCTGAGGGGTCATTCAAAGTTGCAGGTGAAGCATCAAAGAGTATGTACTCTGGTGATGCTGCCGGTGGCAGAGGCGGTGGTGATGGTAATGGTAATGGTAACGGTGGTGGTGGCAGTGGCAGTGGTGGTATTGGTGGGGTCGGTGTTGGATCAAGAGTGCCACAAAAGAGGCCTAGTTTATTACATAGAAGAGCTCAAACTGAACTTTTTACCCAAGGGATTCAACGTGTTGACAGCTTTCAGAAGTTGAAGGCTCATGTTAACAAGGCTTTTCGATGGGGAAACAGATTCCGCGAACCAGATTCCCCATCATCAGACTCCCCGTCGCATTTGAGCCTCGAGGTCATGGCGAACCAGAAACGGCAGTGGTATCAGCTTCATCCCAAATCTATGGATTGTGTAAACTATAAGGAGCCAACCACGCTTTTTGAACATTTTGTGATTGTGGGGCTGCATCCTGATACTAACTTGGATGCTGTGGAGCATGCATTTGCTAGAAGGAAACGATGGCAAATAGAGAAAGAAAAATCTGAATATGTAGATTACAAAATGCCAAAGCCCGACACAACTTTGGAACCACAGATACTTTTCAAATATCCTCTTGGAAAGAAGCTAACAGTACCACGGAAGGAGTTATGCTCCTTTTGCTTTCCTGAAGGTGTAAAGGCATCAATGTTGGAGAGGACTCCATCTCTAAGTGAATTAAATGAACTTGTCTATGGACAGGAACATTTAGGCAGAGATGATCTATCATTTATCTTTACACTCAAGGCAGCAGACAGTGCAACACTTTATGGAGTTTGTTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATCCTAGACATGTATTGTCCTCCATCGCCCCGTCCATTCAGCAGCCGGTTTCTGGTTTCTGCACCACGCTGTTACTGTTTGCTGACTAAAGTTCCTTTCTTTGAGTTACACTTTGAAATGTTATACAGTCTCATTGCACAGGAGCGTCTGAACCGGATAACTCAGTTTGTAAATGAGTTGAATCTTACTGGAGGCATTCCCACGTCGAAGCCAGATGATCAAGTGAGCTTACATGTTGAGTGCCCAGAGACAGAATCATTTAGTGACTGGATGTCTTTTGCAATACCTGTTGAAGGAGCAGCAGTAATTACTGCTGCTGCTGCTGGGATTTTATCAGATGACGAAGTGATACAATTATCACCAAAAATATGGGAATCTCCGAAAATATGGGAATCTCCGAAAAGATGGGATTCTTGCTCTCAATCTCCTGCAAGTATGACTGCAAGTGATGCTTCAGAGTTTTTCCTGGCTAGAGATATCGAAAAGGATGGCAGGAAGAATATCCAAGGTCATGATAATTGTGCTGTTGAGACAACAGAAATTCATGATTCTACAGAAAGAACACAGGGGAATGGTGAAAGTGATCAACTTTCTCCCAAGTTTGGAACACCTTTTAGTGCTAGGAGTTGTGAATTAGAGCGGCTTGAAAGTTTGGACTCACTAGCCAGTACAGCTAAAAGTGTGGTTTGGGAAGATGATGATGATCTTTTTGCAAACAATGAAAGAGACTATGGGGATGGCTTCTTAATCGAATTTCCTACGGAGAAGAAGAATGATTTGCTACAGATAGTGCATCGATATCATTCACATTGTATTCCACCTCGAGGAACCGAATTTATCTTCCATCCACTTGAACATCTACAAGCTATTCAATATATAAGACATTCAGTTGAGGTCCTTGGCTTTAGCAATAGTTTAAATTCCTCTGAACCTGCTCAGGCCAAGGCAAAGTTGGCTGCTGCCGAGGAAGCCTTTGCATTATCAATTTGGACGACTGCAACTACTTGTCGAGTTCTGTCCCTTGAATCTATGCTGTCATTATTTACTGGAGTGTTATTGGAAAAACAGGTGGTAGTAGTGTGCCCCAATCTGGGTGTTCTATCTGCCATAGTGCTATGTCTTATTCCAATGATTCGTCCATTTCAATGGCAGAGTTTATTTCTACCTGTTTTACCTGGATCAATGCTTGATTTTCTTGATGCACCTGTTCCATATATTGTTGGCATACAGCGTATGCCGGATGATTCGCATATGAAAACTAATAACCTTGTTCTTGTTAATGCAACGAAGAATCAGGTTAAAATGTGTCAATTGCCAAAACTTCCACAGTATAGAGAACTTTACTCGCAGTTGAGTCCAATTCATGCCAAACTTAAAAACGAAAGTTCGCATGCTAAAAGACATCCTATACATAGGTGCAATGAAGCTCAGGCTAAAGCTGCAACTCAGTTTTTGAATGTAGTTTGGCACTATTTGGAGTCACTGTGTTCAGATCTAAAATCTCATACAATAACTAGTGTACAATCGAATAACGACCGGGTTTCTTTACTTCTTAAGGAGACATTCATTGATTCATTTCCTAATAGGGACCAGCTATTCATGAAGCTATTTGTAGATACACAACTGTTCAGTGTTTTATCAGATTCTCGTATATCAAGTTTTGAGAGAGGTCAGTTATAG 2586 0.4176 MDTKEEAEPLEDKASSPILQKISEGSFKVAGEASKSMYSGDAAGGRGGGDGNGNGNGGGGSGSGGIGGVGVGSRVPQKRPSLLHRRAQTELFTQGIQRVDSFQKLKAHVNKAFRWGNRFREPDSPSSDSPSHLSLEVMANQKRQWYQLHPKSMDCVNYKEPTTLFEHFVIVGLHPDTNLDAVEHAFARRKRWQIEKEKSEYVDYKMPKPDTTLEPQILFKYPLGKKLTVPRKELCSFCFPEGVKASMLERTPSLSELNELVYGQEHLGRDDLSFIFTLKAADSATLYGVCLHVPEIVQRPPGILDMYCPPSPRPFSSRFLVSAPRCYCLLTKVPFFELHFEMLYSLIAQERLNRITQFVNELNLTGGIPTSKPDDQVSLHVECPETESFSDWMSFAIPVEGAAVITAAAAGILSDDEVIQLSPKIWESPKIWESPKRWDSCSQSPASMTASDASEFFLARDIEKDGRKNIQGHDNCAVETTEIHDSTERTQGNGESDQLSPKFGTPFSARSCELERLESLDSLASTAKSVVWEDDDDLFANNERDYGDGFLIEFPTEKKNDLLQIVHRYHSHCIPPRGTEFIFHPLEHLQAIQYIRHSVEVLGFSNSLNSSEPAQAKAKLAAAEEAFALSIWTTATTCRVLSLESMLSLFTGVLLEKQVVVVCPNLGVLSAIVLCLIPMIRPFQWQSLFLPVLPGSMLDFLDAPVPYIVGIQRMPDDSHMKTNNLVLVNATKNQVKMCQLPKLPQYRELYSQLSPIHAKLKNESSHAKRHPIHRCNEAQAKAATQFLNVVWHYLESLCSDLKSHTITSVQSNNDRVSLLLKETFIDSFPNRDQLFMKLFVDTQLFSVLSDSRISSFERGQL 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00047 861 Gene3D - 631 819 IPR043153 -
Adu06g00047 861 PANTHER BNAA09G10210D PROTEIN 74 859 - -
Adu06g00047 861 ProSiteProfiles Tripartite DENN domain profile. 200 859 IPR037516 -
Adu06g00047 861 SMART uDENN_cls 161 294 IPR005113 -
Adu06g00047 861 MobiDBLite consensus disorder prediction 1 20 - -
Adu06g00047 861 MobiDBLite consensus disorder prediction 32 76 - -
Adu06g00047 861 Pfam DENN (AEX-3) domain 635 732 IPR001194 -
Adu06g00047 861 Pfam uDENN domain 215 293 IPR005113 -
Adu06g00047 861 SMART DENN_cls 322 733 IPR001194 -
Adu06g00047 861 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 74 859 - -
Adu06g00047 861 MobiDBLite consensus disorder prediction 481 502 - -
Adu06g00047 861 Gene3D - 152 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00047 Adu-Chr6 627729 635560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00047 - - adu:107491648 1634.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00047 06 627729 635560 Adu06g00047 06 627729 635560 ECH