Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00022 ATGGGTCAGGGAACTCCGGGCGGTCTCAACCGGCAGGGCATGCCGGGGGACAGGAAGCCAGACAGCGGCGACAAGAAGGACAAGAAGTTCGAGCCGGCGGCGCCGCCAGCTCGCGTTGGCAGGAAACAGCGGAAGCAGAAGGGGCCCGAGGCGGCGGCGCGGCTTCCGACGGTGACGCCGGTTTCGAAGTGCAAGCTGAGGCTGCTGAAGCTGGAGAGGATTAAGGACTACCTTCTGATGGAGGAGGAGTTCGTGGCCAACCAGGAGCGACTGAAGCCGCAAGAGGAGAAGGCTGAAGAGGACCGATCCAAGGTCGATGACCTTCGCGGTTCGCCCATGTCCGTTGGAAACTTGGAGGAGCTCATCGATGAGAATCATGCAATCGTTTCGTCATCGGTTGGCCCTGAGTACTATGTTGGAATCTTGTCTTTTGTCGATAAGGATCAGCTTGAACCCGGTTGCGCCATCTTGATGCATAACAAGGTTCTATCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCAGTCATGAAGGTTGAGAAAGCTCCTTTGGAATCCTACGCTGACATTGGTGGTTTAGATGCCCAGATACAGGAAATTAAAGAAGCAGTTGAGCTTCCTCTCACGCATCCTGAACTGTACGAAGACATTGGTATCAAACCACCTAAGGGGGTCATTTTATATGGAGAACCTGGAACTGGAAAGACCTTGCTTGCAAAGGCTGTTGCAAACTCAACATCAGCAACATTTTTAAGAGTTGTTGGTAGTGAATTAATACAAAAATACTTGGGAGATGGTCCAAAACTTGTGAGGGAACTTTTCCGGGTAGCTGATGATCTCTCCCCTTCAATTGTATTCATTGATGAAATTGATGCAGTTGTTGAGTTTACATGGTATGATGCTCACTCAGGTGGAGAACGCGAAATTCAAAGGACTATGTTGGAGCTTCTTAATCAGTTAGATGGTTTTGATTCAAGAGGAGATGTAAAGGTGATCCTTGCAACCAACAGAATTGAAAGCCTTGATCCAGCTCTGTTGAGACCTGGTCGAATAGACAGGAAAATAGAGTTTCCCCTCCCTGACATCAAAACCAGGAGACGCATTTTCCAGATACACACATCAAGGATGACATTAGCTGATGATGTGAACTTAGAAGAATTTGTTATGACTAAGGATGAGTTTTCAGGGGCTGATATAAAAGCAATATGCACTGAAGCTGGCTTACTTGCTCTACGAGAGCGCCGAATGAAGGTAACACATGCCGACTTTAAGAAGGCAAAGGATAAAGTGATGTTCAAGAAGAAAGAAGGGGTGCCAGAAGGACTGTATATGTAA 1344 0.4777 MGQGTPGGLNRQGMPGDRKPDSGDKKDKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPVSKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVVEFTWYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHADFKKAKDKVMFKKKEGVPEGLYM 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00022 447 SMART AAA_5 224 364 IPR003593 -
Adu06g00022 447 CDD AAA 194 362 - -
Adu06g00022 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 440 IPR027417 -
Adu06g00022 447 Pfam ATPase family associated with various cellular activities (AAA) 228 362 IPR003959 GO:0005524|GO:0016887
Adu06g00022 447 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 31 447 - -
Adu06g00022 447 Pfam Proteasomal ATPase OB C-terminal domain 115 168 IPR032501 -
Adu06g00022 447 MobiDBLite consensus disorder prediction 91 110 - -
Adu06g00022 447 MobiDBLite consensus disorder prediction 1 56 - -
Adu06g00022 447 MobiDBLite consensus disorder prediction 17 35 - -
Adu06g00022 447 Gene3D - 181 362 IPR027417 -
Adu06g00022 447 Gene3D - 113 180 IPR012340 -
Adu06g00022 447 Gene3D - 367 441 - -
Adu06g00022 447 MobiDBLite consensus disorder prediction 91 108 - -
Adu06g00022 447 Pfam AAA+ lid domain 384 428 IPR041569 -
Adu06g00022 447 ProSitePatterns AAA-protein family signature. 332 350 IPR003960 GO:0005524|GO:0016887
Adu06g00022 447 PANTHER BNAA08G13550D PROTEIN 31 447 - -
Adu06g00022 447 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 81 434 IPR005937 GO:0005737|GO:0030163|GO:0036402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00022 Adu-Chr6 319593 322642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00022 189 432 Miscellaneous Gene Families AT3G47060 43.496 1.68e-54 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00022 K03062 - gmx:100798835 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00022 06 319593 322642 Adu06g00022 06 319593 322642 ECH