Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03509 ATGGATACCAAGGGAAGACTCATTGCAGGGTCTCATAACAGGAATGAGTTTGTTCTTATCAATGCTGATGACACTGCAAGAGTGAATGCTGTTACAGAATTGAGTGGACAAATATGCCAGATCTGTGGTGATGAAGTAGAGGTCACAATTAATGGTGATCCATTTGTTGCTTGCAATGAGTGTGCATTCCCTGTTTGCAAGCCTTGCTATGAGTATGAAAGAAGAGAAGGGAACCAAGTTTGCCCTCAATGCAAAACAAGATACAACCGCATCAAAGGTTGTCCTAGAGTTGAGGGTGATGAAGAAGAGGATGGTGTTGATGATTTGGAGAATGAGTTTGATATTGGCAGCCACCCTCATCATCATCACATTGCTGAGACAATGCTATCTTCTCGCCTTAATGGTGGATTAGGAATCAGTACCACACCTTCAGAGTTTGATGCAGCATCTGTGGCAGGTTCTGAGATCCCTCTACTAACTTATGGTCAAGAGGATGTTGGAATCTCTGCTGATAAACATGCCCTCATTATTCCCCCATTCATGCCTCGTGGAAAACGTGTTCATCCTATGCCTTTTCCTGATTCCTCTGTACCCGTTCAAGCAAGAGCTATGGATCCTAAGAAAGACTTGGCAGTTTATGGATATGGAAGTGTTGCATGGAAGGAAAGAATGGAGGACTGGAAGAAGAAGCAATGTGAAAAACTTCAAGTGGTTAAGCATGAAGGGTGTAAGGATCTTGATGAGTTTGATGACCCTGAGTTACCAAAAATGGATGAGGGGAGACAACCACTATGGAGAAAGTTGCCAATAAGTTCAAGCAGAATAAATCCATACAGAATAATCATAGTTCTCAGGATTGCAATTCTCTGCCTCTTCTTTCATTATAGAATTCTGCACCCTGTGAATGATGCATATGCATTGTGGCTCACATCAGTCATATGTGAAATCTGGTTTGCTGCTTCATGGATTCTTGATCAGTTCCCAAAATGGTGTCCAATTGAAAGAGAAACATACCTTGATCGTTTATCTCTAAGGTATGAGAAGGAAGGGAAGCCATCAGAATTAGCTTGTGTAGATGTATTTGTTAGTACTGTTGATCCTATGAAGGAGCCTCCACTTATCACTGCAAACACTGTTCTTTCAATCCTTGCTGTGGATTATCCAGTAGAGAAAGTTGCATGCTATGTCTCAGATGATGGTGCTGCCATGCTTACATTCGAAGCACTTTCAGAGACATCTGAGTTTGCAAGGAAGTGGGTTCCATTCTGCAAGAAGTTCAGCATTGAACCAAGAGCTCCTGAATGGTACTTTGCACAGAAGGTTGACTATCTCAAAGACAAAGTTGATGCAGCATTTATCAGAGAGCGTCGCGCTATTAAGAGGGAGTATGAAGAATTCAAGGTGAGGATTAATGCATTGGTTGCGACGGCACAGAAGGTTCCTGAGGATGGTTGGACAATGCAGGATGGGACTCTATGGCCTGGAAACAATGTTAGAGATCACCCTGGAATGATTCAGGTTTTCCTTGGTCAAAATGGTGTCCGCGACATTGAGGGAAACGAATTGCCTCGCCTTGTTTATGTGTCTCGTGAGAAAAGACCAGGATATGAGCACCACAAGAAAGCTGGAGCTATGAATGCTTTGGTGAGAGTTTCAGCAATTATCTCCAATGCTCCTTACCTGCTGAATGTTGATTGTGATCACTACATAAACAATAGTAAGGCCCTTCGTGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGAAGAAAATTTGCTATGTACAATTTCCTCAAAGATTTGATGGGATCGATCGTCACGATAGATACTCAAATCGCAATGTTGTGTTCTTTGATATCAATATGAAAGGTTTAGATGGAATCCAAGGACCAATATATGTGGGAACTGGGTGCGTCTTCAGGAGGCATGCACTTTATGGATATGATGCCCCCTCTTCCAAGAAACCACCACGGAGGACGTGTAACTGTTGGCCTAAATGGTGTTGCTGCCTCTGTTGTGGATCTCAGAAGAAGAAGAACAAAGGGAAGTCAAGTATGAAAATGTTAAAGAATAAGGATGATACAAAGCACATGCATACACTAGAAAACATAGAAGAGGGAATTGAAGGAGTTGAGAGTGAGAAGTCACTATTGATGTCTCAACTGAAATTTGAGAAAAAATTTGGGCAATCTGCTGTGTTCATAGCTGCGACACTTATGGAAGATGGAGGCCTTCCAAAAGCAGCAAGTTCTGCTACACTCTTGAAAGAAGCCATTCATGTAATTAGTTGTGGTTATGAAGATAAGACAGAATGGGGTAAAGAGGTTGGGTGGATCTATGGCTCAGTTACAGAGGATATTCTAACAGGTTTCAAGATGCACTGTCATGGCTGGAGATCGGTTTATTGCATGCCGAAAAGACCAGCTTTTAAGGGTTCAGCCCCTATAAATCTTTCTGACCGTCTGCATCAAGTTCTCCGGTGGGCGCTTGGATCGGTTGAGATCCTGTTTAGTAGGCATTGTCCTCTATGGTATGGCTATGGTTGCGGCTTGAAGTGGCTAGAGCGGTTTTCTTACATAAACTCAGTTGTTTATCCTCTCACTTCAATTCCCTTGATTGCCTACTGTACTTTGCCTGCTGTGTGTCTTCTCACTGGGAAGTTCATAGTCCCTGAGATTAGCAACTATGCCAGCATAATTTTCATGGCACTCTTCATCTCTATAGCTGCAACTAGCATATTGGAAATGCAATGGGGAGGAGTTGGCATACATGACTGGTGGAGGAATGAGCAGTTTTGGGTGATCGGTGGCGCCTCCTCGCACCTCTTTGCGCTCTTTCAAGGGTTGCTAAAGGTCCTAGCAGGAGTTAACACAAACTTCACTGTGACATCCAAAGCTGCAGATGATGGAGAGTTTGCTGAACTCTACATATTCAAGTGGACATCATTGTTGATTCCTCCATTGACATTGCTCATAATAAACATCATTGGAGTTATTGTTGGTGTCTCTGATGCCATAAACAATGGCTATGATTCTTGGGGTCCTCTCTTTGGGAAGCTGTTCTTTGCACTTTGGGTCATTGTCCATCTTTACCCCTTCCTCAAGGGTGTTATGGGAAAACAAGAAGGTGTTCCTACAATCATTTTGGTTTGGGCTATTCTCCTTGCTTCAATCTTGACACTTCTTTGGGTGAGGATCAACCCTTTTTTGGCCAAAAATGACATTGTTTTGGAACTTTGTGGATTGAAGTGTGATTGA 3258 0.4279 MDTKGRLIAGSHNRNEFVLINADDTARVNAVTELSGQICQICGDEVEVTINGDPFVACNECAFPVCKPCYEYERREGNQVCPQCKTRYNRIKGCPRVEGDEEEDGVDDLENEFDIGSHPHHHHIAETMLSSRLNGGLGISTTPSEFDAASVAGSEIPLLTYGQEDVGISADKHALIIPPFMPRGKRVHPMPFPDSSVPVQARAMDPKKDLAVYGYGSVAWKERMEDWKKKQCEKLQVVKHEGCKDLDEFDDPELPKMDEGRQPLWRKLPISSSRINPYRIIIVLRIAILCLFFHYRILHPVNDAYALWLTSVICEIWFAASWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELACVDVFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFAQKVDYLKDKVDAAFIRERRAIKREYEEFKVRINALVATAQKVPEDGWTMQDGTLWPGNNVRDHPGMIQVFLGQNGVRDIEGNELPRLVYVSREKRPGYEHHKKAGAMNALVRVSAIISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRHALYGYDAPSSKKPPRRTCNCWPKWCCCLCCGSQKKKNKGKSSMKMLKNKDDTKHMHTLENIEEGIEGVESEKSLLMSQLKFEKKFGQSAVFIAATLMEDGGLPKAASSATLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEILFSRHCPLWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGKFIVPEISNYASIIFMALFISIAATSILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFAELYIFKWTSLLIPPLTLLIINIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILLASILTLLWVRINPFLAKNDIVLELCGLKCD 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03509 1085 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 506 653 IPR029044 -
Adu05g03509 1085 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Adu05g03509 1085 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Adu05g03509 1085 SUPERFAMILY Nucleotide-diphospho-sugar transferases 371 894 IPR029044 -
Adu05g03509 1085 Pfam Cellulose synthase 358 1074 IPR005150 GO:0016020|GO:0016760|GO:0030244
Adu05g03509 1085 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Adu05g03509 1085 PANTHER CELLULOSE SYNTHASE 1 1084 - -
Adu05g03509 1085 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1084 - -
Adu05g03509 1085 SUPERFAMILY RING/U-box 26 107 - -
Adu05g03509 1085 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03509 Adu-Chr5 107670393 107677082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03509 1 1084 Glycosyltransferase AT2G21770 77.747 0.0 1747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03509 K10999 - gmx:100798759 1990.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03509 05 107670393 107677082 Adu05g03509 05 107670393 107677082 ECH
Adu05g03509 05 107670393 107677082 Adu09g03077 09 118554164 118559806 PCT