Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03462 ATGAGCAATTACTTTCAGAAATGGGATTATGCATTATTAGTGGTGCTTATTATGTTGTATGATGCAGGATTAATCCATGGGGAAGTTACATGCTTAGAGAATGAGAGGCAAGCACTCCTCAGCTTCAAACAAGGCATTCATGATGATAGGGGCATGCTGTCGACATGGAGCAACGATGATTGTTGCAAATGGCAGGGAATTACATGCGGCAACCAAACAGGTCATGTACTCCGCCTTCATCTCCGTGGATCATATTCACATCATTTATCTGGTCAAGCCAATATCTCCACTTTGATTGACTTGCAATATCTTCAACATTTAGATCTCAGTTACAATAGTTTTCTTGGTAGTTATATCTCAGAACATATTGGCTTGTTTCCCAAGTTAAAATATCTCAATCTCTCACGAGCTGATTTTGTAGAAAGTATTATTCCTTATCAACTAGGGAATTTGTCTCAACTACAGTACCTTGATATAAGTCATAATCATTTTGGTGGAGAAATCCCTCCTCAACTAAGCAAGCTTACACATTTACAGTATTTGGATCTCAGCTACAATGATCTTGATGGAGTTATCCCATATCAACTCAAACACTTGGGACAACTACAATATCTCTGTCTTCAAGGGAATAGTGATCTTTCAGGAGCAATCCCTTTTCAAAGTGGTGATCTTCCATTGCTGCACACTCTCAAGCTCCGTGGTGACTTTGATCTTGAAACTCAAGGTGTAGAATGGGTGTCTAAACTCTCCTTTTTAAATACTCTTGACTTCAGTTCAATGAGTCTTGGCAACTCTCACCAGTGGCTTCAAATGATTCGTAAGCATATTCCAAACTTAACAGAGCTGAGGCTGTCGGATTGTAGTCTTTCTGATAATGATGTTCAACTTTTGTTTCATATTCATTCTAACTATTCTTCCACTACTCCCCTTACCATCCTTGATTTCTCTTATAATATGTTGACATCATCCACATTTCAGTTGTTGTCCAACCTCAGCTTTAACCTTCGGGAGCTTTATCTTTCATCTAATGATATTGTTTTGTCACAATCTCATTACCCAAACTTTCCTTCTCTAGTGAGCCTTGACCTTTCTTATAATAATCTCACTTCATTACTGTTTCAAGGAAATTTCAACTTCGGCTCCAACCTTGAAATGCTTTATTTGTCAAATTGCAGTCTTACAGATACAAGTTTTCTGGTGTCATCTACTTCCATTGTGAATTCTTCATCTTCTATTGTTAGCCTTCATCTCTCCTTTAACCTGTTGACATCATCAAACATATTCCACTGGATTTTCAACTTCACAGCCAATCTTCACACCCTTTCTCTTCGTGACAACTTATTAAAAGGTCCTGTTCCACTAGGTTTTGACAAAGCAGTGAACTCTCTTGAATATCTCGATCTCTCTCATAACAATCTGCAAGGAGAGATTCCCCATTTCTTTGGAAACATTTGCACACTACAATCACTACACTTACACATATTTCAGGAGCTATCTTTGTCTTACAATCAAATCACTGGCGTGATACCTAAAAGCATCAGAGTGTTATCTGAGTTGGAATATCTGTCCCTAGAAGGGAATTCTTTGAAGGGTGAAATCACTGAATCACATCTCACAAGCTTTTCCAAATTAAAATACTTGCCTTTGTCTCACAACTCATTATCTCTAAAGTTTGTCCCCGGATGGATTCCTCCTTTTCAGTTAATATATTTGAGTCTAGCATCTTGCAAGTTGGGTCCTAACTTTCCAAGTTGGCTACACACTCAAAATTACTTACAATATCTGGATATTTCTAATGCGGGTATTCATGGCTCTGTGCCGGAGTGGTTTTGGTATAAGATTCAATTTCTTGAGTCTTATTTGAATATGTCTCACAATAATTTTACAGGTGCTATTCCAAATTTATCACTAAGGCTCCCAAAAGGAGGATCTACAGATTTGAGTTCAAATCAATTCGAGGGTGTAATTCCATCCTTTTTGCTACATTTTTCTTGGTTGATTCTCTCTAGAAACAAATTTTCAAATGTATCATCACTGTTGTGTCAAGAGAACAACATTGGTAGGGAATTGGGCACTCTAGATTTATCAAACAATCAATTGAAGGGTTCATTGCCTGATTGTTGGAAATCTTTAAGCTCGCTATTGTTTCTTGATCTAAGTAATAATAACTTGACAGGGAAGATTCCACCATCCTTGGGCTCCCTTGTCAAATTGGAAGCTTTGGTCTTACGAAGCAATGGATTCATTGGCAAACTACCTTCTAGTTTGAAGAACTGCACCAGTTTACTTTTGTTGGATGTCAGTGAAAATTTGCTGTCAGGTCCAATACCCTCTTGGATCGGTGAGAGTCTACACCAATTGATAGTTTTGAGCATGTCAGGAAATAGTTTCTCTGGAAATATTTCTAAGCATCTCTGTTACCTAAAGAAAATTCAACT 2438 0.3774 MSNYFQKWDYALLVVLIMLYDAGLIHGEVTCLENERQALLSFKQGIHDDRGMLSTWSNDDCCKWQGITCGNQTGHVLRLHLRGSYSHHLSGQANISTLIDLQYLQHLDLSYNSFLGSYISEHIGLFPKLKYLNLSRADFVESIIPYQLGNLSQLQYLDISHNHFGGEIPPQLSKLTHLQYLDLSYNDLDGVIPYQLKHLGQLQYLCLQGNSDLSGAIPFQSGDLPLLHTLKLRGDFDLETQGVEWVSKLSFLNTLDFSSMSLGNSHQWLQMIRKHIPNLTELRLSDCSLSDNDVQLLFHIHSNYSSTTPLTILDFSYNMLTSSTFQLLSNLSFNLRELYLSSNDIVLSQSHYPNFPSLVSLDLSYNNLTSLLFQGNFNFGSNLEMLYLSNCSLTDTSFLVSSTSIVNSSSSIVSLHLSFNLLTSSNIFHWIFNFTANLHTLSLRDNLLKGPVPLGFDKAVNSLEYLDLSHNNLQGEIPHFFGNICTLQSLHLHIFQELSLSYNQITGVIPKSIRVLSELEYLSLEGNSLKGEITESHLTSFSKLKYLPLSHNSLSLKFVPGWIPPFQLIYLSLASCKLGPNFPSWLHTQNYLQYLDISNAGIHGSVPEWFWYKIQFLESYLNMSHNNFTGAIPNLSLRLPKGGSTDLSSNQFEGVIPSFLLHFSWLILSRNKFSNVSSLLCQENNIGRELGTLDLSNNQLKGSLPDCWKSLSSLLFLDLSNNNLTGKIPPSLGSLVKLEALVLRSNGFIGKLPSSLKNCTSLLLLDVSENLLSGPIPSWIGESLHQLIVLSMSGNSFSGNISKHLCYLKKIQ 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03462 812 ProSiteProfiles Leucine-rich repeat profile. 462 484 IPR001611 GO:0005515
Adu05g03462 812 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 382 812 - -
Adu05g03462 812 SMART LRR_typ_2 101 126 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 688 710 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 711 735 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 175 198 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 460 483 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 660 683 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 151 174 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 516 543 IPR003591 -
Adu05g03462 812 SMART LRR_typ_2 355 375 IPR003591 -
Adu05g03462 812 Gene3D Ribonuclease Inhibitor 235 399 IPR032675 -
Adu05g03462 812 PANTHER OS10G0469600 PROTEIN 382 812 - -
Adu05g03462 812 SUPERFAMILY L domain-like 646 811 - -
Adu05g03462 812 Gene3D Ribonuclease Inhibitor 400 534 IPR032675 -
Adu05g03462 812 Gene3D Ribonuclease Inhibitor 537 812 IPR032675 -
Adu05g03462 812 Gene3D Ribonuclease Inhibitor 29 234 IPR032675 -
Adu05g03462 812 PANTHER OS10G0469600 PROTEIN 195 311 - -
Adu05g03462 812 PRINTS Leucine-rich repeat signature 358 371 - -
Adu05g03462 812 PRINTS Leucine-rich repeat signature 460 473 - -
Adu05g03462 812 SUPERFAMILY L domain-like 59 403 - -
Adu05g03462 812 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 28 158 - -
Adu05g03462 812 Pfam Leucine rich repeat 173 210 IPR001611 GO:0005515
Adu05g03462 812 Pfam Leucine rich repeat 496 554 IPR001611 GO:0005515
Adu05g03462 812 Pfam Leucine rich repeat 689 747 IPR001611 GO:0005515
Adu05g03462 812 PANTHER OS10G0469600 PROTEIN 28 158 - -
Adu05g03462 812 PANTHER OS10G0469600 PROTEIN 104 215 - -
Adu05g03462 812 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Adu05g03462 812 Pfam Leucine Rich repeat 154 167 IPR001611 GO:0005515
Adu05g03462 812 Pfam Leucine Rich repeat 277 297 IPR001611 GO:0005515
Adu05g03462 812 SUPERFAMILY RNI-like 275 633 - -
Adu05g03462 812 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 195 311 - -
Adu05g03462 812 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 104 215 - -
Adu05g03462 812 Pfam Leucine Rich Repeat 462 482 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03462 Adu-Chr5 107102722 107123891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03462 665 812 Receptor kinase-like Gene Family AT5G46330 31.081 1.25e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03462 - - gmx:102662253 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03462 05 107102722 107123891 Adu05g03462 05 107102722 107123891 ECH