Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu05g03409 | ATGGGTTCTCGCTACGAAATCGAAGTGAAGCTGGAATCAGCCCGCGGGCTCAAGAACGTGAACTGGCGCTACGGGCCCAACAGGCCCTACGCCGTGGTATGGGTCGACCCAAGCAACAAGACGTCGACACGTGTCGACGAAGAAGGAGACACCGATCCCAACTGGGACGAAACCCTCGTCATTCCGCTTCCACCAGAGCCACTGGAGAACCTCACGCTTCACGTGGACGTCGTCCACGCTGGCAGAGAAGAAGACACAAAGCCACTAATCGGCTCGGCTCGGCTCAAATTAGCCGAGGTTCTAGACGACGTTGGAGTCGGCGTTCCATTAAGCAGAACTCTCAAACTGAAACGACCCTCCGGAAGGCCACACGGAAAGGTTAACGTTAACGTTACTGTTAGAGAGCCACGCTATCGTGCGCCGGATCCATACAATGCTCCACCTTACGGCGTTCCACCGCCAGGGTCCAGGGATTACTCTCCTGCGCCAGGATCGGGATACGGTTACCCTTACGGTGGTGCTCCGCCGGTGCAGGGGTCGTATTATTCGAATCCACCGGCGGGGTATCCGTACGGCGGGGGATACGGTGGAGCTCCTCCTCAGCCGGCGGCGTATGGTGAGGGAGCGTACGGTATGGAGGAGAAGAAGAAGAGTAAGTTTGGTGGGATGGGGACGGGTTTGGCGGTTGGAGCGTTAGCTGGTGCGGTTGGTGGAATAGCGCTTGTGGAAGGTGCTGATTATTTGGAGGATAAGATTGCTGATGATGCTGCTGAGAAGGTTGAGGATGATCTTGGCTACGATGATGGTGGTTACGACGGTGATGATTTCTAG | 831 | 0.5644 | MGSRYEIEVKLESARGLKNVNWRYGPNRPYAVVWVDPSNKTSTRVDEEGDTDPNWDETLVIPLPPEPLENLTLHVDVVHAGREEDTKPLIGSARLKLAEVLDDVGVGVPLSRTLKLKRPSGRPHGKVNVNVTVREPRYRAPDPYNAPPYGVPPPGSRDYSPAPGSGYGYPYGGAPPVQGSYYSNPPAGYPYGGGYGGAPPQPAAYGEGAYGMEEKKKSKFGGMGTGLAVGALAGAVGGIALVEGADYLEDKIADDAAEKVEDDLGYDDGGYDGDDF | 276 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu05g03409 | 276 | PANTHER | PROTEIN SRC2-LIKE | 1 | 276 | - | - | |
| Adu05g03409 | 276 | ProSiteProfiles | C2 domain profile. | 1 | 110 | IPR000008 | - | |
| Adu05g03409 | 276 | PANTHER | INGRESSION PROTEIN FIC1 | 1 | 276 | - | - | |
| Adu05g03409 | 276 | MobiDBLite | consensus disorder prediction | 141 | 159 | - | - | |
| Adu05g03409 | 276 | CDD | C2_SRC2_like | 6 | 129 | IPR044750 | GO:0006952 | |
| Adu05g03409 | 276 | SMART | C2_3c | 6 | 109 | IPR000008 | - | |
| Adu05g03409 | 276 | Pfam | C2 domain | 7 | 101 | IPR000008 | - | |
| Adu05g03409 | 276 | Gene3D | C2 domain | 2 | 135 | IPR035892 | - | |
| Adu05g03409 | 276 | MobiDBLite | consensus disorder prediction | 138 | 162 | - | - | |
| Adu05g03409 | 276 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 134 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu05g03409 | Adu-Chr5 | 106464270 | 106465476 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu05g03409 | - | - | ahf:112751830 | 378.637 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Adu05g03409 | 05 | 106464270 | 106465476 | Adu05g03409 | 05 | 106464270 | 106465476 | ECH |