Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03400 ATGTCTGAAGCTTCTATGGCAGTCATGAAACCTGAGATGAAATCTTATATATGGCTTAAAACTGTGGATGGTTCTATTCAACAAGTAGAGCAAGATGTAGCCATGTTTTGCCCCATGATTTTCCAGGAAATACTTAAGACAGGCATGGGATCTTCCAAAACTTATGCCATATCTCTTCCACAACGTGTCAATCCTTCAATCTTGGGTTTAATACTTGACTACTGTCGTTTCCACCAAGTGCCAGGCCACTCTAATAAGGAGCGGAAAACCTTTGATGAAAAGTTTATTAGGATGGACACAAAGAAGTTATGTGAATTGACATCTGCTGCTGATAGCCTCCAATTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATAGAAGGAAAAACACCAGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTCACTGAGGAGGAGAAACTCGAGCCTCTTAGAAATGTAACTGATGATCCACGTATTCGACTTCTAAACAGATTATATGCTAGGAAAAGGAAAGAGTTGAAAGAAAAGAAGAAACTAAAGAATGTTGACATTGAGGAGGAGCCTAAAGATGAGCGCTCAGTTGATGACCTTCTTTCATTTATTAATGGTGCAGATGGGGATATAAAGGAAATGAGTGCAAATAAGAATAAAAAGAAGAATAGGAGAAGGAAAGGCCATGCAAAAGATCTTTCTTTGGAAAATGTCAATGAAAACAAAAGGGAGTTGGATTCTGTTCCCTTTGCATGTCACAATCACAATGTTGACAATGCCTTAAAGGCCTCTCCAAGCAAACACTCACAGACGCAAGATTTACCTCCCATGAGTTTTTCTCCAAAGCTCGAGTTTATTGATGGTGATCTTGATGATGAATTAGATCCTGCAATGAAGGAGGAACTTGACAGGGAAGTGGAAGATTTTGCTCGAAGATTAAATTCAGATTGGCCCGAAAGGATGCAAATTTTATCTTTGGGCCAAGACAGAAGACTAGTTCCAATTTCTATGAATAGCAATGTTTCCACACGCATCTTCACAGGTATGGGTTAA 1065 0.3991 MSEASMAVMKPEMKSYIWLKTVDGSIQQVEQDVAMFCPMIFQEILKTGMGSSKTYAISLPQRVNPSILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEKKKLKNVDIEEEPKDERSVDDLLSFINGADGDIKEMSANKNKKKNRRRKGHAKDLSLENVNENKRELDSVPFACHNHNVDNALKASPSKHSQTQDLPPMSFSPKLEFIDGDLDDELDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISMNSNVSTRIFTGMG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03400 354 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Adu05g03400 354 PANTHER OS03G0107000 PROTEIN 1 270 - -
Adu05g03400 354 SUPERFAMILY POZ domain 15 79 IPR011333 -
Adu05g03400 354 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
Adu05g03400 354 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Adu05g03400 354 SMART skp1_3 14 115 IPR001232 GO:0006511
Adu05g03400 354 Coils Coil 166 189 - -
Adu05g03400 354 PANTHER SKP1 1 270 IPR016897 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03400 Adu-Chr5 106393637 106397051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03400 - - gmx:100775387 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03400 05 106393637 106397051 Adu05g03400 05 106393637 106397051 ECH