Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03397 ATGTCAATCCTGTGTGGCCTTCCTCTTCTTGAGTGTGTGTATTGTCTCGGTTGCGCTCGCTGGGCTTGGAAAAGATGTCTTCACAATGCAGGCCATGACAGTGAGAATTGGGGCTTTGCCAACGCCGAAGAGTTCGAGCCGGTCCCTCGCCTTTGCAGATACATCCTAGCTGTGTATGAAGATGATCTTAGACACCCCCTTTGGGCACCTCCTGGTGGTTATGGAATCAACCCAGATTGGCTAATACACAAGAAAACATACGAAGATACTTGCGGACGCGCTCCACCCTATATATTGTATATTGATCATGATCATGCTGATATAGTTCTTGCCATCAGGGGCCTAAACTTGGCAAAAGAGAGTGACTATGCAGTTCTTTTGGATAATAGATTGGGGAAGAGGAATTTTGATGGAGGGTATGTTCACAATGGGCTATTGAAAGCTGCTGGATGGATTTTGGACACAGAATGCAAGGTTCTGAGGGAGTTGGTGGAAAGATATCCAGATTACAGACTTACTTTTGCTGGACATTCACTTGGATCAGGAGTTGCAGCTATGTTGACCATGGTGGTGGTGCAGAATCGCGATAAGCTTGGAGATATTGACAGGAAGAGAGTCAGGTGCTACGCCATCGCACCGGCTAGGTGTATGTCGCTAAATTTGGCGGTGCGATATGCAGATGTCATCAACTCTGTTGTGTTGCAGGATGACTTCTTACCAAGGACAGCCACCCCATTGGAAGATATATTCAAATCTGTTTTCTGTTTGCCATGCCTATTGTGTTTGAGGTGCATGAGAGATACATGCATATCTGAGGAGAAGCTGCTCAAAGATCCAAGGAGACTCTATGCACCTGGTCGCCTTTATCACATTGTTGAGAGAAAGCCTTTTAGAATGGGAAGGTTTCCCCCGGTTGTAAGGACGGCGGTGCCTGTCGACGGAAGATTCGAGCATATAATCCTTTCATGTAACGCCACGTCTGATCATGCCATAATTTGGATAGAGAAAGAAGCACAAAAGGCTCTAGATTTAATAATAGAGAAAGACCATGATGCCATGGAAATCCCTGAGAAACAAAAGATGGTGCGTCAAGAAACAATGACTAGGCACAAAGAAGAACACAGAGCAGCACTACAGAGGGCTAAGACATTAGATGTTCCTCATGCTTATACGCCACCATCAGAATATGGCACTTTTGATGATGAGAAAGAAGAAGAAGAAAAGAGCTCAAGAAGAAGATTAAAGGGTGGTTCTTCTTTTGGTTCAACTCCTAATAAAACCAATAATGCTAGTGAAAGCTGGGATGAGTTAATTGAACGCCTTTTTGATAAGGATGAGCATGGCCACATGGTGCTGAAGAAATAA 1365 0.4454 MSILCGLPLLECVYCLGCARWAWKRCLHNAGHDSENWGFANAEEFEPVPRLCRYILAVYEDDLRHPLWAPPGGYGINPDWLIHKKTYEDTCGRAPPYILYIDHDHADIVLAIRGLNLAKESDYAVLLDNRLGKRNFDGGYVHNGLLKAAGWILDTECKVLRELVERYPDYRLTFAGHSLGSGVAAMLTMVVVQNRDKLGDIDRKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSVFCLPCLLCLRCMRDTCISEEKLLKDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIILSCNATSDHAIIWIEKEAQKALDLIIEKDHDAMEIPEKQKMVRQETMTRHKEEHRAALQRAKTLDVPHAYTPPSEYGTFDDEKEEEEKSSRRRLKGGSSFGSTPNKTNNASESWDELIERLFDKDEHGHMVLKK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03397 454 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Adu05g03397 454 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 454 - -
Adu05g03397 454 MobiDBLite consensus disorder prediction 415 433 - -
Adu05g03397 454 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Adu05g03397 454 CDD Lipase_3 44 241 - -
Adu05g03397 454 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 454 - -
Adu05g03397 454 SUPERFAMILY alpha/beta-Hydrolases 41 272 IPR029058 -
Adu05g03397 454 Gene3D alpha/beta hydrolase 39 253 IPR029058 -
Adu05g03397 454 MobiDBLite consensus disorder prediction 382 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03397 Adu-Chr5 106357091 106359236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g03397 1 454 Miscellaneous Gene Families AT3G49050 71.247 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03397 - - mtr:MTR_1g100950 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03397 05 106357091 106359236 Adu05g03397 05 106357091 106359236 ECH