LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g03342	ATGAAAAAGACCAGAATCACAACAAAGGGCGACACACTTAGGAGAGATTCCTACTACATAGATCCTGCAAGCGGCTATGTGTTCCGCTCGCTAAGAGACGTTGATCGTTATCTTGAATCTGGGGAAATAGGAAGGAACGCGTTCAAGCCGAAAGACAACGGCGATACAGAGTTAAAAGCTGACAAGTTCTCTCCAGTATCGACCACAAAACCAACTGTATCTGTTAGCATGGGTTTGAGCTCAGATTCAGACAGGATATCCAATGATCAACAGGATCAAAAGCCTGTGTGTTCAGCAGAATATGCATCTACACCAATCTCTGAAAATACTTCTGCTCAGTGCACGATGGGGACAAAATCGACCACCTTAGGCTCGGATCAGATAGAAGGGAAGGCTAGTGAAGAAGATTCTCAAGCAAAGCAACTTCCCCAAAATGAACAAATGGGAAATGAAAAATCTCAAAAGCGACAAAGGCGTAAAAAGGAGATCAATCTTCCTCGCCGTTCCTCAAAGCGCCTTGCTGGAATTCAGCTTGATCCAGTTCCAGAACTTGTAACAAGAAGCCGAGCACGCCGAGCTGCAGTTAAACAATCAGGCCAGGGAGAAACCATCAGAAATGAGGATAAATCCTCTAACAGCTTGCCTAATGCCGCAGCGAAAAGGATGAATGTGCCTGATGGTGGATCAGAAACAAAGTGCAAATCTGAGAGTGCAGCAAACATGCTACAGTCAACTAAGTTCTCTACTCCAGAAAGGCTTCCCAACAAGACTACACAAGAGGATGGAAGCAACAAGGATCAAGAATGCTTCTCATTTTGGCCTCAAGAGAACAATGCTACTATGAAAGATCATGTGCTCGATTACTCCCATGAGTTTCCTCTTAAAGAACTGCTGCAGGACCCATGCATTGCATTTGCAATACAAACTCTCACCGGCGAAACATTCGAAATGCAAGTATCCGGCGAATCAAGTGAGCATTCTGAAGCTCTTACTGCAAATATGGGTGGTGATGACAAGGGAGGGTGCAATGTGTTCTCACATCCAGAAAACTATGCTATTATACCACAACAACATGCTGGTGCAGCCGAAACAGCCATCAAGACTAATGAAAACCAAACAGGATCATCATCTTCTGAAAAGGAACCTGATGTTTCATGGATGGATCCATGCATTGAATTTGCAATCAAAACGCTCACTGGCTCTATCCCGTTAGATTCAGAGCAGAATCCTAAGAACTGCATTCAACAGCAGCTTTGCTCATCAAACACAAATCCCAGCGAAATGGCCTATAAACAGGAACCAATGTTTAAAGAGTCTTTTGTGGATCCAACAGCATCATCAACACACAAGAAATGTTGA	1359	0.4386	MKKTRITTKGDTLRRDSYYIDPASGYVFRSLRDVDRYLESGEIGRNAFKPKDNGDTELKADKFSPVSTTKPTVSVSMGLSSDSDRISNDQQDQKPVCSAEYASTPISENTSAQCTMGTKSTTLGSDQIEGKASEEDSQAKQLPQNEQMGNEKSQKRQRRKKEINLPRRSSKRLAGIQLDPVPELVTRSRARRAAVKQSGQGETIRNEDKSSNSLPNAAAKRMNVPDGGSETKCKSESAANMLQSTKFSTPERLPNKTTQEDGSNKDQECFSFWPQENNATMKDHVLDYSHEFPLKELLQDPCIAFAIQTLTGETFEMQVSGESSEHSEALTANMGGDDKGGCNVFSHPENYAIIPQQHAGAAETAIKTNENQTGSSSSEKEPDVSWMDPCIEFAIKTLTGSIPLDSEQNPKNCIQQQLCSSNTNPSEMAYKQEPMFKESFVDPTASSTHKKC	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g03342	452	PANTHER	OS04G0193200 PROTEIN	2	440	IPR038945	-
	Adu05g03342	452	MobiDBLite	consensus disorder prediction	45	95	-	-
	Adu05g03342	452	MobiDBLite	consensus disorder prediction	62	95	-	-
	Adu05g03342	452	SUPERFAMILY	DNA-binding domain	3	46	IPR016177	GO:0003677
	Adu05g03342	452	MobiDBLite	consensus disorder prediction	45	59	-	-
	Adu05g03342	452	PANTHER	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13	2	440	-	-
	Adu05g03342	452	MobiDBLite	consensus disorder prediction	108	266	-	-
	Adu05g03342	452	MobiDBLite	consensus disorder prediction	233	257	-	-
	Adu05g03342	452	MobiDBLite	consensus disorder prediction	108	128	-	-
	Adu05g03342	452	MobiDBLite	consensus disorder prediction	199	218	-	-
	Adu05g03342	452	ProSiteProfiles	Methyl-CpG-binding domain (MBD) profile.	1	63	IPR001739	GO:0003677
	Adu05g03342	452	Gene3D	-	1	100	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g03342	-		-	adu:107491164	895.19

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu05g03342	05	105873919	105878243	Adu05g03342	05	105873919	105878243	ECH