Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03334 ATGCGAACCTTTATCGTACACAGCTCCAAGCTCATCAAAAGCAAGATAAAAAATATCCCTATGATTCAGCATCAGCATCAGCATCACCATCACCATCATCCGAATTTCAATCCCACGCGAGCAATGTCGCAATCCACCTCGATCCCGAAGAAAATGCAGAGGGTTCGCGACCACGGCTACGACAACTACATGGAAGTCGAGAAGAAAACTCGGAAGGTCCTCAAGGTCCAGAACATCATCCTCAACGAGCACAACCAATCGCTCCCAATCTCGCGCCTCGAAACCCTAGCGCACCGCATAGGCTTCACGCGCAACACAGTCGGTGCTTTCATCCTTAAGTTCCCTCACGTCTTCGAAATCTTCGAGCACCCCGTGCAGCGCGTGCTCTTCTGCCGCCTCACGCGCCAGGCAATCCTCCAAATCAAGCAGGAGAATGAAGCATTGCTCGCTCAGGTTCCACGCGCCGTCACGTGCCTCCGCAAGCTTCTCATGATGTCGAACACGCAGCGGCTTCGCCTCGAGCACGTGAGGATCGCACGCTCCGCTCTAGGGTTACCGGACGACTTCGAATTCTCGGTGGTTTTAAGGTATCCTCAATTTTTTCGCTTAGTTGATGCAAATGAGAGAAGGAACAAGTACATTGAGCTTGTAGAAAGAGAACCTAGTTTAGCAGTCTGTGCAATTGAGAATGTTAGAGAGAGAATTTACAGGGAGAGAGGTGGTGATGCTGAAGATGTTAGGTTCTCATTTCTAATTGATTTTCCACCAGGTTTTAAGATTGGGAAGTATTTTAAGATTGCAATGTGGAAGTGGCAGAGGTTACCTTATTGGTCCCCTTATGAGGATGTTTCTGGCTTTGATTTGAGGTCGATTGAGGCGCAAAAGAGGATGGAGAAGAGGGCTGTTGCCTCAATCCACGAGTTGTTGTCATTGACCGTGGAGAAGAAGATTACCTTGGAGAGGATCGCACACTTCCGGCAGGCGATGAACCTGCCGAATAAGTTGAAGGATTTCCTTCTCCAGCACCAGGGGATTTTCTACGTGTCGACAAGGGGGAACCAGGGGAAGCTCCACACGGTTTTCCTGCGAGAGGCTTATAGGAAGGGTGAGTTGATTGAGCCAAATGATCTGTATTTGGCGCGGAGGAAGCTGGCTGAGTTGGTCTTGTTGAGCCCCCGGAAGGCGAGGATTGACAGGGAATTGGTTGGATACAGGAGAAGCAGGTTGGATGATGAGATGGGGCAGATAACAAGGGTAGCTGTGGAGGATGCCTATGAGGACTTCAAGGGTGAAGATGTAATGGATCAGGATAAGGATGAAGAGGGAAATTTGACCTCGGACATAGGTTCAGATGTTGATTCGGATGTTGGAGATGAAGACAATAGTTTTGATGAAGATAGTGTATCAAGGCAAGAAACATCATAA 1425 0.4884 MRTFIVHSSKLIKSKIKNIPMIQHQHQHHHHHHPNFNPTRAMSQSTSIPKKMQRVRDHGYDNYMEVEKKTRKVLKVQNIILNEHNQSLPISRLETLAHRIGFTRNTVGAFILKFPHVFEIFEHPVQRVLFCRLTRQAILQIKQENEALLAQVPRAVTCLRKLLMMSNTQRLRLEHVRIARSALGLPDDFEFSVVLRYPQFFRLVDANERRNKYIELVEREPSLAVCAIENVRERIYRERGGDAEDVRFSFLIDFPPGFKIGKYFKIAMWKWQRLPYWSPYEDVSGFDLRSIEAQKRMEKRAVASIHELLSLTVEKKITLERIAHFRQAMNLPNKLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNDLYLARRKLAELVLLSPRKARIDRELVGYRRSRLDDEMGQITRVAVEDAYEDFKGEDVMDQDKDEEGNLTSDIGSDVDSDVGDEDNSFDEDSVSRQETS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03334 474 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 27 449 IPR045040 GO:0003723
Adu05g03334 474 Pfam Plant organelle RNA recognition domain 55 391 IPR021099 GO:0003723
Adu05g03334 474 MobiDBLite consensus disorder prediction 428 445 - -
Adu05g03334 474 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 27 449 IPR040295 -
Adu05g03334 474 MobiDBLite consensus disorder prediction 24 43 - -
Adu05g03334 474 MobiDBLite consensus disorder prediction 428 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03334 Adu-Chr5 105780389 105782293 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03334 - - adu:107491171 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03334 05 105780389 105782293 Adu05g03334 05 105780389 105782293 ECH