Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03307 ATGGGGGGTGCTAGTTCCTCAATTAGTGTAGCAGAAATTGAGGATGTTGTTTCAGAATCAACAGGGCTTGGTGACATTCCAGAGAGCTGCATCTCATTCATTATGAAGAGTTTTGATCCAAAAGAGATTTGCCAATTGGCTAAAGTGAACAAAACTTTTCATAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAATTGCCACAATCATATAAGTTCCTTCTCAATAAGATTCTTGGTGATAATAACAAAGAGGATCTAATTAGAACCATGTCCAAGAAAGAGGTTTATGCCAAACTATGTCGACCTAATTTCTTTGATGGTGGCACCAAAGAAGTTTGGTTGGATAGAAGCAGTGGACAAGTTTGTTTGTTCATCTCATCAAAGTCTTTCAAGATTACAGGAATTGATGACAGAAGATATTGGAATAATATTCCAACTGAAGAATCCAGGTTTAAAAGTGTTGCATACCTTCAACAAATGTGGTGGGTTGAAGTCTTGGGGGAATTAGACTTTGAATTTCCAAGAGGGAAATATAGCATTTTTTTCAGGCTTCATTTGGGAAAGACCTCAAACAGATTGGGCCGCAGAGTGTGCAACCTGGGCCAAGTCCATGGTTGGGACATCAAGCCCGTTAGATTTCAACTATCCACATCTGATGGCCAGAATTCACTTTCCCAGTGTTATTTGAGTGGGCCAGGAGAGTGGACCCATTATCCTGTTGGAGATTTTGTCATTGATAAGCCCAATGGGCCCACAACCATCAAGTTTTCCCTGGCCCAAATTGATTGTACTCACACAAAAGGCGGGCTTTGCATAGATGGGGCAGTGATTTGCCCAACCCAGAATACAAAACAATTTTGA 864 0.4086 MGGASSSISVAEIEDVVSESTGLGDIPESCISFIMKSFDPKEICQLAKVNKTFHRASSADFVWESKLPQSYKFLLNKILGDNNKEDLIRTMSKKEVYAKLCRPNFFDGGTKEVWLDRSSGQVCLFISSKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVLGELDFEFPRGKYSIFFRLHLGKTSNRLGRRVCNLGQVHGWDIKPVRFQLSTSDGQNSLSQCYLSGPGEWTHYPVGDFVIDKPNGPTTIKFSLAQIDCTHTKGGLCIDGAVICPTQNTKQF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03307 287 Pfam Phloem protein 2 122 280 IPR025886 -
Adu05g03307 287 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Adu05g03307 287 SUPERFAMILY F-box domain 17 102 IPR036047 GO:0005515
Adu05g03307 287 PANTHER F-BOX PROTEIN 17 285 - -
Adu05g03307 287 PANTHER F-BOX PROTEIN PP2-A15 17 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03307 Adu-Chr5 105480243 105484587 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03307 - - gmx:100816360 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03307 05 105480243 105484587 Adu09g02396 09 111246993 111249917 ECH
Adu05g03307 05 105480243 105484587 Adu05g03307 05 105480243 105484587 ECH
Adu05g03307 05 105480243 105484587 Adu09g02396 09 111246993 111249917 PCT