Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g03281 ATGGCTTCTTCGCACCCAAAGAATGTGGGAATCCTTGCCATGGACATCTACTTTCCTCCCACATGCGTAAAACAGGAAGCTTTGGAGGCTCACGATGGGGCCAGCAAAGGGAAATACACTATTGGGCTTGGACAAGATTGCTTGGCATTCTGCACTGAGGTTGAAGATGTTATCTCTATGAGCTTGACAGCTGTATCCTCGCTTCTTAAAAAGTATAAGATTGATCCGAAACAAATTGGACGCATGGAAGTTGGTAGTGAAACTGTCATTGACAAAAGCAAATCCATTAAGACCTTCCTGATGCAACTCTTCGAGGAGAGTGGTAATACTGACATCGAAGGTGTTGATTCAACAAATGCATGCTATGGTGGAACAGCAGCTCTGTTCAATTGCGTGAATTGGGTGGAGAGTAGTTCATGGGATGGTCGCTATGGACTTGTCATATGTGCAGATAATGTGGTTGTTGATGGAAAACTCTCGCAGAATTGTTATCTCATGGCACTTGATTCTTGCTACAAGGTTTTCTGTGAGAAATTCGAAAAGTTGGAGGGGAAGCCCTTTTCAATGGCAGAGGCTGATTACTTTGTGTTTCATTCTCCATATAACAAGCTTGTCCAAAAAAGCTTTGGTCGGCTATACTACGATGACTTCCTGAGAAATCCCAGTTTTGTTGATGAAGCTGCCAGAACATCCTTGGAACCTTATAAATCACTATCGGGTGACGAAAGCTACAATGGTCGTGATCTTGAAAAGGCAAACCAGCAAGCCTCGAAAAAGATATATGACACGAAGGTGCAGCCCAGCACGTTAATACCGAAAGAAGTTGGTAACATGTACACTGCATCTCTTTATGCAGCATTTGCATCACTCCTTCACAATGAGAACAGCTCACTGGTTGGTAAACGTGTAGTTATGTTCTCATATGGAAGTGGTTTAACGGCTACAATGTTCTCCTTCAAGATTCAAGAAGGTCAAGGCCCCTTTACTTTGTCCAACATTGTAACATTGATGGATGTGGCTGGCAAGTTGAAGCAGAGAGTTGAGTTTCCTCCTGAAAAATTTGTAGAAACAATGAAGCTGATGGAACACCGATATGGGGCAAAGGACTATGTGACAAGCGGTGACTGTAGCAACTTACCTGCAGGCACCTTCTATCTTACCAAAGTTGATTCCATGTACCGGAGATTTTATGCCAGAAAGGACACTACCAGCACATGA 1218 0.4327 MASSHPKNVGILAMDIYFPPTCVKQEALEAHDGASKGKYTIGLGQDCLAFCTEVEDVISMSLTAVSSLLKKYKIDPKQIGRMEVGSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVICADNVVVDGKLSQNCYLMALDSCYKVFCEKFEKLEGKPFSMAEADYFVFHSPYNKLVQKSFGRLYYDDFLRNPSFVDEAARTSLEPYKSLSGDESYNGRDLEKANQQASKKIYDTKVQPSTLIPKEVGNMYTASLYAAFASLLHNENSSLVGKRVVMFSYGSGLTATMFSFKIQEGQGPFTLSNIVTLMDVAGKLKQRVEFPPEKFVETMKLMEHRYGAKDYVTSGDCSNLPAGTFYLTKVDSMYRRFYARKDTTST 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g03281 405 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 154 400 - -
Adu05g03281 405 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 1 151 - -
Adu05g03281 405 SUPERFAMILY Thiolase-like 153 399 IPR016039 GO:0016746
Adu05g03281 405 SUPERFAMILY Thiolase-like 8 155 IPR016039 GO:0016746
Adu05g03281 405 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 153 400 IPR013746 GO:0004421|GO:0006084|GO:0010142
Adu05g03281 405 CDD init_cond_enzymes 8 319 - -
Adu05g03281 405 Gene3D - 154 402 IPR016039 GO:0016746
Adu05g03281 405 TIGRFAM HMG-CoA-S_euk: hydroxymethylglutaryl-CoA synthase 154 400 IPR010122 GO:0004421|GO:0008299
Adu05g03281 405 ProSitePatterns Hydroxymethylglutaryl-coenzyme A synthase active site. 109 124 IPR000590 GO:0004421|GO:0008299
Adu05g03281 405 Gene3D - 2 153 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g03281 Adu-Chr5 105141986 105146294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g03281 K01641 - gmx:100794889 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g03281 05 105141986 105146294 Adu05g03281 05 105141986 105146294 ECH