Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01893 ATGACTAATACCGTGTTGGTGCAGGGCTGTTGCTTCATTCATAACATCATCAAAATGAAGAAATTGTATGGAGGAGTCTTAATTGCTTCATTGTTTATGCTGTTTATGCTTATGATCCTGCGATATGGGGTCATGAAAAATCCTATCAGTGAAGCTTATCCAACAATACCTGTCTCCCTTAATGTTAATGGTACTAATCCTCTAGAATGGATAAAATCTATGGCTCCTCCTGCCGTTCGCAATCCAGCTGTTACATCTCAAGTTATTTCTGCTGATATTTTAGCATCTAGCCTCTTTTTGGGGAGCAACTTTTCGAAAGAAGAGCAACAAGCTCTGCAGACACGGAACCACTTGAAACACTTACTTGATCATGCTCAGGGTTTACCTAATGCAGTAGAAGCTATCAAGGAAGCTGCGGGTGTATGGAATAGTCTTATTTCTTCAGTTGAAGAGCAAAGACAAGGTTATGCAAATGATAGTTCTAGAACAAAAGAGAAACAGTGTCCCCATTTTCTTAACAATATGAGTTCCCCTGAACTCAGTAACAGTAGTTACGAACTGCAAGTACCCTGTGGACTGACACAGGGTTCTTCCATTACTGTAATTGGCATTCCAAATGGTCTTCTTGGCAATTTTCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAGCCTGACCCCCCTATAATTTTGCACTATAATGTTAGGCTTCATGGTGACAAAATCACTGAAGATCCTGTAATTGTCCAAAACTCCTGGACAGCAGCTCATGATTGGGGAGGAGAGGAGCGTTGCCCATCACCCACTCCTGAAAAGGTTAAGAAAGTTGATGACTTGGAAGAGTGCAATAAGATTGTAGGGAAGAACATAAGCCAACATTACATGGCTGGCATGCATTCCCACACTTCAAGTCAATCTTTAGCAACAGAAGAGCACTCAAAACAGAGTAAATACTTTCCTTTTAAGCAAGGTTTACCTTTCGTTGCAACTCTTCGAGTGGGATCAGAGGGAATTCAGATGACAGTTGATGGAAAGCACATAACCTCATTCACTTTCCGTGAAACTCTGGAGCCATGGGTTGTCAATGAGATACGAATTTCAGGGGACATCAAGTTAATTTCTGTTCTTGCCAGTGGTCTGCCCACATCAGAGGATTCAGAGCATATTGTCGATCTAGAATCACTAAAAGCAAGTCCTGTATCAGCACAGACCCCATTAGATCTCTTCATTGGTGTCTTCTCTACTGCGAACAATTTCAAGCGTCGGATGGCTGTTAGAAGAACCTGGATGCAATACAATGCAGTTCGAACAAACAAAACAGCCGTGCGCTTCTTTGTTGGTTTGCACAAAAGCCAAATAGTAAATGAAGAACTATGGAAAGAAGCACAAACCTATGGAGACATACAGCTGATGCCATTTGTTGACTACTACAGTATTATAACCTGGAAGTCTTTAGCTATTTGCATTTTTGGGGTAATGTCTAATATTTTTCTTTTAAGTTGGAGAGTCTCCCCAACTTCATTGACATGA 1530 0.4131 MTNTVLVQGCCFIHNIIKMKKLYGGVLIASLFMLFMLMILRYGVMKNPISEAYPTIPVSLNVNGTNPLEWIKSMAPPAVRNPAVTSQVISADILASSLFLGSNFSKEEQQALQTRNHLKHLLDHAQGLPNAVEAIKEAAGVWNSLISSVEEQRQGYANDSSRTKEKQCPHFLNNMSSPELSNSSYELQVPCGLTQGSSITVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNSWTAAHDWGGEERCPSPTPEKVKKVDDLEECNKIVGKNISQHYMAGMHSHTSSQSLATEEHSKQSKYFPFKQGLPFVATLRVGSEGIQMTVDGKHITSFTFRETLEPWVVNEIRISGDIKLISVLASGLPTSEDSEHIVDLESLKASPVSAQTPLDLFIGVFSTANNFKRRMAVRRTWMQYNAVRTNKTAVRFFVGLHKSQIVNEELWKEAQTYGDIQLMPFVDYYSIITWKSLAICIFGVMSNIFLLSWRVSPTSLT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01893 509 SUPERFAMILY Concanavalin A-like lectins/glucanases 185 378 IPR013320 -
Adu05g01893 509 Pfam Galactosyltransferase 420 490 IPR002659 GO:0006486|GO:0016020|GO:0016758
Adu05g01893 509 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 84 492 IPR002659 GO:0006486|GO:0016020|GO:0016758
Adu05g01893 509 Pfam Galactoside-binding lectin 185 376 IPR001079 GO:0030246
Adu05g01893 509 Gene3D - 175 376 - -
Adu05g01893 509 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 185 378 IPR001079 GO:0030246
Adu05g01893 509 PANTHER - 84 492 - -
Adu05g01893 509 SMART galectin_3 185 378 IPR001079 GO:0030246
Adu05g01893 509 CDD GLECT 185 375 IPR001079 GO:0030246
Adu05g01893 509 SMART Gal_bind_lectin_2 189 377 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01893 Adu-Chr5 58041365 58046954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01893 19 491 Glycosyltransferase AT1G26810 61.378 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01893 K14413 - gmx:100782548 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01893 05 58041365 58046954 Adu05g01893 05 58041365 58046954 ECH