Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01752 ATGACTGGTGGTAGTGGATACATGGTAGAAGTTACTGGACTTTCGCCAAAAACCACCGAGAAAGATCTCCACCATTTCTTCGCTTTCTCCGGCGCGATCGAGCACGTTGAAATCGTTAGGTCTGGTGATTGTGCTTGTACTGCATATGTGACATTCAAAGATGCATATTCTCAAGAAACTGCTTGCTTGCTTAGTGGAGCCACTATTTTAGATCAACGTGTATGCATAACGCGTTGGGGGCAGTGCGACGATGGCTATGGTTTTTGGAATCAGCCTTCCTACAACCATGCCGATGAGACTGCTTCAGATACACAACATAGAGGCCAATTTGTTTCCTCTGCTGGAGAAGCAGTTACTGCGGCTCAAGAAGTTGTGAAGACCATGCTAGCAAAGGGATATGTTCTCAGTAAGGACGCATTGGCTAAGGCTAGAGAGTTCGACGAATCTCATCAGGTTTCTGCGACTGCAACAGCGAAAGTTTCTGAACTGAGCGAGAGACTTCGCCTCGCTGACAAGATATCAGCAGGTGTTGGAGCTGTGAAATCTGTGGATCAGAAATATAATGTCTCTGAAACAGCCAGGTCAGCTGCATCTGCAACTGGAAGATCGGTGGCAGCCGCCGCGGACTCTGTAGTAAATAGTAGCTATTTTTCGAAGGGAGCATTGTGGCTGTCAGGTGCTCTAACCCGAGCAGCTCATGCTGCTTCTGACTTGGGTGCTCGTGGCGGTGGTCAGCACTGA 741 0.4845 MTGGSGYMVEVTGLSPKTTEKDLHHFFAFSGAIEHVEIVRSGDCACTAYVTFKDAYSQETACLLSGATILDQRVCITRWGQCDDGYGFWNQPSYNHADETASDTQHRGQFVSSAGEAVTAAQEVVKTMLAKGYVLSKDALAKAREFDESHQVSATATAKVSELSERLRLADKISAGVGAVKSVDQKYNVSETARSAASATGRSVAAAADSVVNSSYFSKGALWLSGALTRAAHAASDLGARGGGQH 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01752 246 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 5 242 - -
Adu05g01752 246 CDD RRM_Vip1_like 9 77 IPR034360 -
Adu05g01752 246 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 5 242 - -
Adu05g01752 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 81 IPR000504 GO:0003723
Adu05g01752 246 Gene3D - 4 81 IPR012677 -
Adu05g01752 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 72 IPR000504 GO:0003723
Adu05g01752 246 SUPERFAMILY RNA-binding domain, RBD 7 78 IPR035979 GO:0003676
Adu05g01752 246 SMART rrm1_1 8 78 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01752 Adu-Chr5 40464234 40467076 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01752 - - gmx:100805907 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01752 05 40464234 40467076 Adu05g01752 05 40464234 40467076 ECH