Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01678 ATGGAAGGAGACGGTGTGAAATTCGTCAGATGGGGTTACGAGGTTCGAACTTCATCTGAGCCCTGCATCTCCGCCATCAACTCCTACTACCATCAGGTGATGAGCTATGGCAGAGATAGGTGTGTGATTCTTGATGCGCTGGACCATGATAACAACTGTGTCCTGGCTAACATCTTAGCCGCTCATTTCCTTCTATCCGTTGACCCTTTTCGAGCTTCCTCTTGTCTTCTCTCCGCCAAATTGCACCTTGAAAATGCTACATTCTATGAGAAACTAGTTTTTGAATCCATTAATTACTTGATATCTGAAGAGAGAGATGATGATGTGGCTCTTCAACTGCATTCTAAGGTTCTAAAAGAGTTTCCAAAGGATCTAGTTACACTAAAGAGAGCACAAATCTTGTGCTTCTATATGGGTCGGCCTGATCTGTCTTTCTCACTTGTTAATCAGGTTCTGCCCCAAAATGAAGGAGAAAACTACTTATATGGCATGCTTGCTTTTCCTTTATTGGAGCTTGGAAAAATGAGAGATGCTGAGGAAGCTGCAAAAAGGGGACTCAACATCAATGAGGAAGACAGCTGGTCACAGCATGCTCTTTGCCATGTTCTTCAATACGAGTGCCGTTTTAAAGAAGCTGTGAACTTCATGGAAAAATGTTCACCATCATGGAGTTCTCTTTCATCTTTTATGTTAACCCACAATTGGTGGCATGTAGCCCTTTGTTACTTAGAAGGTAGTGCACCAAACCAAAGAGTGCTTGAAGTATATGACAATCATATATGGAAGGAGTTAGACAAAACTGATGCCCATGGCGCAGAGGTTTACTTGAATGCCGTGGGTTTGCTTTTGCGGTTGTATGTACGAGGTGAATCAGATCTCACTGATAATCGTCTCAAGGTGCTTGCTGAATGCCTAACCGATCAAGCAAACTGGTATCTAGAGTGGCACCTTGATGTATTGACAGTGTGGGCTTTGGCAAAATCTGGAAAATTTTCTGAAGCAGCAGATCTCCTTAAGGGTTTGAAAGAAAGGGTTTCAAGGATGAATATAAAGAAACAACAATCAATGCAGAGAGCAATGAGGCTTGCAGAAGCAGTTTATGCGTATGGAACAGGTAATGACAAACATGGAGTGGAATTACTAGGTCCAGATTTTGATGCCATGGATTATAAGATAATTGGGGCATCTGATGAACAAGTTGATGTATTCAATGATGTTTGGTTTAGCATGTTGCTGAATGCTGAAGAAGCAATGAAGGCCATTGAAGCAATCGAAAAGCAAATCAAGAAGAGGGAAGGCATCCCCTTATATTGGCGAATGCTGGAGAGAGCGTACAAACTCGCAAACAGGCCAGAAGCTGAACATGCAAAGGCGAAGGCCAAGGCATTGGAGGAATCTTATTTCAACTAA 1410 0.4241 MEGDGVKFVRWGYEVRTSSEPCISAINSYYHQVMSYGRDRCVILDALDHDNNCVLANILAAHFLLSVDPFRASSCLLSAKLHLENATFYEKLVFESINYLISEERDDDVALQLHSKVLKEFPKDLVTLKRAQILCFYMGRPDLSFSLVNQVLPQNEGENYLYGMLAFPLLELGKMRDAEEAAKRGLNINEEDSWSQHALCHVLQYECRFKEAVNFMEKCSPSWSSLSSFMLTHNWWHVALCYLEGSAPNQRVLEVYDNHIWKELDKTDAHGAEVYLNAVGLLLRLYVRGESDLTDNRLKVLAECLTDQANWYLEWHLDVLTVWALAKSGKFSEAADLLKGLKERVSRMNIKKQQSMQRAMRLAEAVYAYGTGNDKHGVELLGPDFDAMDYKIIGASDEQVDVFNDVWFSMLLNAEEAMKAIEAIEKQIKKREGIPLYWRMLERAYKLANRPEAEHAKAKAKALEESYFN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01678 469 SUPERFAMILY TPR-like 114 219 IPR011990 GO:0005515
Adu05g01678 469 Coils Coil 411 431 - -
Adu05g01678 469 Gene3D Tetratricopeptide repeat domain 58 222 IPR011990 GO:0005515
Adu05g01678 469 Coils Coil 338 358 - -
Adu05g01678 469 CDD StaR_like 49 407 IPR033891 -
Adu05g01678 469 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 8 467 IPR033891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01678 Adu-Chr5 33020180 33026248 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01678 - - lja:Lj2g3v1349460.1 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01678 05 33020180 33026248 Adu05g01678 05 33020180 33026248 ECH