Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01618 ATGCTTTTGTTGTGGATATCCAGGGAGACTTTTGGAGACAACAATGTTGGCCTTCTTACAGGAGATTCCGCTGTCAACAGGGATGCTCAAGTCTTGATTATGACCACAGAGATTTTGCGCAACATGCTATATCAGAGTGTTGGTAATATTTCTTCAGGAGGTGGACTTCTCCATGTTGATGTGATCGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGTGGTACAGTTTGGGAAGAAATTGTTATTTATTGCCCTAAAGAAGTTCAACTAATTTGTTTGTCAGCAACTGTTGCAAATCCTGATGAGTTGGCTGGCTGGATTGGCCAGATTCATGGTTCAACAGAGTTGGTAACATCATCAAAACGCCCAGTTCCACTAACTTGGCATTTCTCTTTGAAAAATTCCTTATTGCCACTTCTTGATGAGAAAGGAACACGCATGAACAGGAAGCTGTCTCTCAATTATTTACAACTTCAAGGTGCAGGGGTCAAATCTTACAATGATGATTGGCCTAGAAGAAAGAATTCCCGGAGACGAGGAACGAGGTACGATAGTGATGGTAGCACACTGGAAAATCGTTCTCTTTCAAAGAATAATATAAATGCAATTCGTCGTTCACAGGTTCCTCAAATAATTGATACTCTATGGCAACTTCAGTCTAGGGATATGCTGCCAGCTATATGGTTTATATTTAGCAGAAAGGGCTGTGATGCAGCTGTGCAATATGTTGAAAATTGCAATCTTTTAGATGAGTGTGAAACAAGTGAGGTTGAACTTGCCTTGAAGAGGTTCCGCATTCAATATCCTGATGCTGTCAGAGAAACCGCTGTGAAAGGACTTCTGCAAGGAGTTGCTGCACATCATGCGGGTTGTCTTCCCTTGTGGAAAGCTTTCATTGAAGAATTGTTTCAAAGAGGGCTTGTCAAGGTTGTTTTTGCTACAGAAACACTGGCTGCAGGAATCAACATGCCAGCTAGAACTGCTGTTATTTCATCCCTCAGCAAAAGAGGTGATAGTGGACGTGTCCAGTTAAGCACAAATGAACTGCTTCAGATGGCTGGGCGTGCTGGGCGAAGGGGCATTGATGAAAGTGGTCATGTGGTGCTCATACAGACACCTAATGAGGGTGCTGAAGAGTGCTGCAAGGTGCTGTTTGCTGGACTTGAGCCCCTAGTCTCACAATTTACTGCTTCGTTTGGAATGGTTTTAAATCTTCTTGCAGGTGTGAAAGCCATTCATAGGTCAAATGAGTCAGATGATGGGAGACCTTCATCAGGGAGAACTTTGGAAGAAGCTAGGAAGTTAGTTGAGCAGAGTTTTGGAAATTACGTTAGTAGCAATGTTATGCTGGCTGCTAAAGAGGAAATTAATAAAATTGAGAAAGAAATTGAGATTCTGATGTCAGAAATAACTGATGAAGCCATAGATAAAAGAAGCAGGAAAGCTTTATCACAGCGACAATATAAGGAGATTGCAGAATTGCAGGAGCAGTTAAGGGCAGAAAAACGTGTTCGGGCTGAACTGCGTAAACAGATGGAAGCAACAAGAATATCTGCTCTAAAACCTTTGTTGGAAGACCCTGAAAATGGACATCTACCATTTTTGTGCTTGCAGTACACAGATTCTGAAGGAACTCAACATTCACTGCCTGCTGTGTTTCTGGGGAAGGTTGACTCACTTAATGCTTCAAAACTTAAGAACTTGGTATCTTCTGCTGATTCTTTTGCACTAAATTTAGGTGATGCGGAACCAACCATTACTGATTCAGTATTGGATGATGGCCTTGAACCATCATACCATGTGGCTCTTGGTTCTGATAACTCTTGGTATCTATTTACAGAAAAGTGGATTAAAACAGTATATGGGACTGGCTTTCCTAACGTTCCATTGGCTCAAGGGGATGCTCTACCACGAGAAATTATGAGCACTCTCCTTGATAAGGAGGACATGAAGTGGGATAATCTTGCGCAATCTGCCTATGGTGGTTTATGGTTCATGGAAGGCTCTTTAGATACATGGTCTTGGAGTCTGAATGTTCCTGTTTTGAGTAGCTTCTCTGAAAATGATGAGCTACTGCTAAAATCTCAAGCCTACAGAGATGCTGTAGACCGTTACAAGGATCAAAGAAATAAAGTTTCACGCTTGAAGAAAAAGATTTCTCGTACAGAAGGCTACAAAGAATACAGTAAAGTCATAGACGCAGTCAAGTTTACGGAGGAGAAAATCAAGCGCTTGCAGAATAGATCAAAACGTCTAACTAATCGAATAGAACAAATTGAACCCTCCGGATGGAAGGAGTTTATGCAGGTTAGCAATGTCATACATGAAACCAGAGCATTGGACAAAAACACGCAGGTCATATTTCCACTTGGGGAAACTGCAGCAGCAATCCGAGGAGAAAACGAGCTTTGGCTTGCAATGGTTCTTCGCAGCAAAATTCTTCTAGAGCTAAAACCTCCACAACTTGCTGCAGTTTGTGCAAGCTTGGTCTCTGAGGGTATCAAACTCCGACCATGGAAGAATAACAGTTACATTTACGAGCCAACCACAACAGTTATGAATGTCATAAAGTTATTGGATGAACAAAGAAGTGCCCTGTTGACCATTCAGGAGAAACATGGGGTGATGATACCTTGCTGTTTGGATAGCCAGTTTTGCGGTATGGTTGAAGCATGGGCTTCTGGGTTGACTTGGAGAGAGATAATGATGGATTGTGCAATGGACGAAGGCGATCTTGCTCGCCTCCTACGTAGGACTATTGATCTGCTAGCTCAGATTCCAAAATTGGCAGACATTGATCCTTTGTTGCAGCGCAATGCAAAGGCTGCATATGATGCCATGGACCGGCCGCCAATTAGTGAGCTTGCCGGGTAG 2880 0.4247 MLLLWISRETFGDNNVGLLTGDSAVNRDAQVLIMTTEILRNMLYQSVGNISSGGGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGSTELVTSSKRPVPLTWHFSLKNSLLPLLDEKGTRMNRKLSLNYLQLQGAGVKSYNDDWPRRKNSRRRGTRYDSDGSTLENRSLSKNNINAIRRSQVPQIIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYVENCNLLDECETSEVELALKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGRVQLSTNELLQMAGRAGRRGIDESGHVVLIQTPNEGAEECCKVLFAGLEPLVSQFTASFGMVLNLLAGVKAIHRSNESDDGRPSSGRTLEEARKLVEQSFGNYVSSNVMLAAKEEINKIEKEIEILMSEITDEAIDKRSRKALSQRQYKEIAELQEQLRAEKRVRAELRKQMEATRISALKPLLEDPENGHLPFLCLQYTDSEGTQHSLPAVFLGKVDSLNASKLKNLVSSADSFALNLGDAEPTITDSVLDDGLEPSYHVALGSDNSWYLFTEKWIKTVYGTGFPNVPLAQGDALPREIMSTLLDKEDMKWDNLAQSAYGGLWFMEGSLDTWSWSLNVPVLSSFSENDELLLKSQAYRDAVDRYKDQRNKVSRLKKKISRTEGYKEYSKVIDAVKFTEEKIKRLQNRSKRLTNRIEQIEPSGWKEFMQVSNVIHETRALDKNTQVIFPLGETAAAIRGENELWLAMVLRSKILLELKPPQLAAVCASLVSEGIKLRPWKNNSYIYEPTTTVMNVIKLLDEQRSALLTIQEKHGVMIPCCLDSQFCGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQIPKLADIDPLLQRNAKAAYDAMDRPPISELAG 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01618 959 Coils Coil 451 471 - -
Adu05g01618 959 MobiDBLite consensus disorder prediction 169 188 - -
Adu05g01618 959 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 224 409 IPR001650 -
Adu05g01618 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 111 IPR027417 -
Adu05g01618 959 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 8 955 - -
Adu05g01618 959 CDD SF2_C_Ski2 206 374 - -
Adu05g01618 959 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 117 IPR014001 -
Adu05g01618 959 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 8 955 - -
Adu05g01618 959 Pfam DSHCT (NUC185) domain 788 954 IPR012961 -
Adu05g01618 959 Coils Coil 730 757 - -
Adu05g01618 959 Gene3D - 6 124 IPR027417 -
Adu05g01618 959 Gene3D - 741 951 - -
Adu05g01618 959 SMART DSHCT_2 784 958 IPR012961 -
Adu05g01618 959 Gene3D - 125 393 IPR027417 -
Adu05g01618 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 377 IPR027417 -
Adu05g01618 959 MobiDBLite consensus disorder prediction 169 192 - -
Adu05g01618 959 SMART helicmild6 276 362 IPR001650 -
Adu05g01618 959 Coils Coil 486 513 - -
Adu05g01618 959 Pfam DEAD/DEAH box helicase 24 100 IPR011545 GO:0003676|GO:0005524
Adu05g01618 959 Coils Coil 690 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01618 Adu-Chr5 29920536 29926798 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01618 K26077 - gmx:100780908 1639.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01618 05 29920536 29926798 Adu05g01618 05 29920536 29926798 ECH