Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01501 ATGCTATGCTCTCTAATCCAGCTCCGCCGCTACGCTACTAGCTCCTCTTCCCCACTCTCTCCCCTCCACAATCTCGGTTACTTCTTTTACTCCACCGTAACCGCCATGGTGCCCCACCCCAAGGACGATGAGTACCTGAACGCTGCCATTCCGAAGCGTATCAAGATGTTCGAGTCCATCCAGGCCGAGCAGAAAACCCAGCGCCTCTCACTGTCGCCGGATCCAATCAAGGTCACACTTCCCGACGGCACGGTCAAGGACGCCGCCAAGTGGCAAACGACACCGTTCGATGTGGCGAAAGAGATTTCCAAGAACCTCGCCAACAACGCACTCATCGCGAGGGTCAATGGTGTGCTATGGGACATGGCCAGGCCTCTCGAGCAGGATTGCGAACTCAGGATCTACAAGTTCGAAGACGACGAAGGCCGCGATACGTTCTGGCATTCTAGCGCTCACATTCTTGGCCAGTCGCTTGAGTTGGAGTACGGATGCAAGCTCTGCATTGGGCCTTGTACTACAAGAGGAGAGGGTTTCTATTATGATGCGTTTTATGGTGACTTGGGATTGAATGATGATCATTTCAAGCAAATTGAGGCTGGGGCGTTGAAGGCAGCAGGGGAGAAACAACCTTTTGAGCGCATTGAAGTAACACGTGATCAAGCACTTGAGATGTTTTCAGATAATATGTTCAAGGCAAGCATAGCAGTTGAAATTATCAATGATTTGCCTGCTGATAAAACTATCACAGTATACAGATGTGGTCCACTAGTAGATCTGTGTCGTGGACCACATATACCCAATACTTCATTTGTTAAGGCAATTGCCTGTTTGAAGGCTTCTTCAGCATATTGGAGGGGGAACAAAGATCGGGAGACTTTACAAAGAGTTTATGGCATATCTTATCCTGATCAGAAGAGTTTAAAGGAATATTTGCTTAGGCTGGAGGAGGCTAAAAAGTATGATCACAGGATTTTGGGAGTGAAACAGGAGCTTATTTTTCATCATGAATGGAGCCCAGGAAGCTGGTTTTTCCTTCCACATGGTGCACTGGTATACAAAAAATTGATAGGTTTCATAGAGAGTCAATACAGAGTCAGGGGCTATCAAGAGGTCATATCTCCAAATGTATTTAACATGGATCTCTGGAAGCAATCTGGGCACTGCTTGGTCTTCAAGCATAGAGTTCGCTCGTACAGGGAACTTCCCCTTCGCATGGCTGATTTTGGGGTCTTGCATAGAAATGAGGCTAGTGGTGCTTTGAGTGGATTGACACGTGTTAGGAGATTTCAGCAGGATGATGCACATATTTTTTGCAGGGAGTCTCAGATAAAGGATGAAGTTAGAGAAGCCTTGAAGTTCATCGATTATGTCTATGAAATATTTGGTTTCACATACGATCTCAAGCTTTCAACGAGGCCAGAGAAATCCATAGGAGAAACAGCAACATGGGAGAAAGCTGAAAGTGCCCTTAAGGAAGCTCTGGATGAATTTGGGAAGCCTTGGCAGCTGAATGAAGGGGATGGTGCATTCTATGGACCAAAGATTGATATCGATGTATCTGATGCATTGAGTAGGAAATTTCAGTGCGCAACTTTGCAGCTTGATTTCCAACTACCTGATCGTTTTAAGTTGGAATACTCGGCTGAGGATGAAGCCAAGATTGAGAGGCCTGTCATGATACACAGGGCCATTCTAGGATCTGTTGAGCGCATGTTTGCCATACTTTTAGAGCACTACAAGGGTAAATGGCCCTTCTGGCTAAGTCCTCGTCAAGCAATTGTTTGCCCTGTGTCGGAGAAATCACAAGCTTATGCAGAGAAGGTGAAAGATGAAATCTACAGCAAAGGGTTTCATGTTGATGCTGATTTAACAGATAGGAAGATTCAAAAGAAGGTGCGAGAGGCTCAGCTAGCACAGTACAACTACATCTTGGTTGTTGGAGAGCAGGAAGCAGAAACTGGACAGGTGAGCGTGCGGGTAAGAGATAAGGCGGACCTTACCACTATGAGTATCGAGGGCCTGCTCGAACGGTTCAGTGAAGATGCAAAAAATTTCCGTTGA 2061 0.4634 MLCSLIQLRRYATSSSSPLSPLHNLGYFFYSTVTAMVPHPKDDEYLNAAIPKRIKMFESIQAEQKTQRLSLSPDPIKVTLPDGTVKDAAKWQTTPFDVAKEISKNLANNALIARVNGVLWDMARPLEQDCELRIYKFEDDEGRDTFWHSSAHILGQSLELEYGCKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFKQIEAGALKAAGEKQPFERIEVTRDQALEMFSDNMFKASIAVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGNKDRETLQRVYGISYPDQKSLKEYLLRLEEAKKYDHRILGVKQELIFHHEWSPGSWFFLPHGALVYKKLIGFIESQYRVRGYQEVISPNVFNMDLWKQSGHCLVFKHRVRSYRELPLRMADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRESQIKDEVREALKFIDYVYEIFGFTYDLKLSTRPEKSIGETATWEKAESALKEALDEFGKPWQLNEGDGAFYGPKIDIDVSDALSRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQAYAEKVKDEIYSKGFHVDADLTDRKIQKKVREAQLAQYNYILVVGEQEAETGQVSVRVRDKADLTTMSIEGLLERFSEDAKNFR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01501 686 Gene3D - 139 301 - -
Adu05g01501 686 CDD ThrRS_core 321 589 IPR033728 -
Adu05g01501 686 CDD TGS_ThrRS 76 141 - -
Adu05g01501 686 CDD ThrRS_anticodon 589 678 - -
Adu05g01501 686 Gene3D - 74 134 IPR012675 -
Adu05g01501 686 SMART tRNA_SAD_4 248 297 IPR012947 GO:0004812|GO:0005524|GO:0043039
Adu05g01501 686 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 248 297 IPR012947 GO:0004812|GO:0005524|GO:0043039
Adu05g01501 686 Gene3D Bira Bifunctional Protein; Domain 2 303 387 IPR045864 -
Adu05g01501 686 Gene3D Bira Bifunctional Protein; Domain 2 388 582 IPR045864 -
Adu05g01501 686 PANTHER THREONINE-TRNA LIGASE 385 681 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 PANTHER THREONINE-TRNA LIGASE 38 387 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 TIGRFAM thrS: threonine--tRNA ligase 386 680 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 PRINTS Threonyl-tRNA synthetase signature 412 435 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 PRINTS Threonyl-tRNA synthetase signature 513 541 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 PRINTS Threonyl-tRNA synthetase signature 557 570 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 PRINTS Threonyl-tRNA synthetase signature 584 596 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 PRINTS Threonyl-tRNA synthetase signature 379 407 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 Hamap Threonine--tRNA ligase [thrS]. 141 684 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Adu05g01501 686 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 399 584 IPR006195 -
Adu05g01501 686 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 385 579 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu05g01501 686 Pfam TGS domain 76 136 IPR004095 -
Adu05g01501 686 SUPERFAMILY ThrRS/AlaRS common domain 138 319 IPR018163 GO:0000166
Adu05g01501 686 SUPERFAMILY Class II aaRS and biotin synthetases 321 576 IPR045864 -
Adu05g01501 686 Gene3D - 583 686 IPR036621 -
Adu05g01501 686 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 385 681 - -
Adu05g01501 686 PANTHER THREONINE--TRNA LIGASE, CYTOPLASMIC 38 387 - -
Adu05g01501 686 SUPERFAMILY TGS-like 76 136 IPR012676 -
Adu05g01501 686 ProSiteProfiles TGS domain profile. 74 136 IPR004095 -
Adu05g01501 686 SUPERFAMILY Class II aaRS ABD-related 577 682 - -
Adu05g01501 686 Pfam Anticodon binding domain 591 680 IPR004154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01501 Adu-Chr5 25210973 25218539 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01501 K01868 - gmx:100812652 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01501 05 25210973 25218539 Adu05g01501 05 25210973 25218539 ECH