Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01397 ATGTCCTGTTATCATATATGGTCCGCCGAACAAGATATGCGAGTAATTTTCTTGCtGAGATGGCGGCCGTGGCGTCGTCGGAGCAGCAGCAACAGCATCACCAAGAGAAGCGAATCGAGGACGAACTCTCGTACCCGATCATGGTGGCGGAGCGTGTTCGCGCGGCAGCTGACGAGGCTGACTCGTGAGTGCCCCATCCGCCATGTCGCCGCCAAAGCCTCCAAGAACCTCGACCGCGCTCCCTCCCTCGTCCGCAAGTGCAAGCACCGCTCCATCCTCCGCCGTGTCGTCACCATCATCTCCGCCGCAGACTTCCGCAAGGTCCTCTCCTACCTCGAAGCTTCCATCGGCGACATGCGCTGGCTGCTCTCCATCCTCGACGCCGACGGCTCCGCGGCGGCCGCAGGCGGAGGTGGCGGCATCGTCCTCTCACTCCCTCCGATCGCCAGCAACGACCCCATTCTGTCTTGGGTATGGTCTTTCATTGCTAGTGTTCAAATGGGTCAATTGAACGATAGAGTAGAAGCCGCTAATGAACTTGCCTCGCTTGCGAATGATAACGATAGGAACAAGAAGATCATTGTTGAGGAAGGTGGGGTTCCACCTTTGTTGAAGCTCTTGAAAGAGAGTTCTTCGCCCGTTGCGCAAATTGCTGCGGCTAGCGCCTTGTGTAACTTGGCTAATGATTTGGAGAGGGTTAGGGTCATTGTGAGTGAGCTTGGTGTCCCTATTGTTGTGCAGGTTCTTGCTGATTCTCCCATGAAGGTGCAGATATGGGTTGCCCAATTGGTTGCCCGGATGGCCGAGCATGACCCTGTTGCACAGGAGGATTTCGCCCGGGAGAATGCCATTAGGCCTCTTGTTACACTGTTGTCCTTTGATACATTTGTGGATGATTCTATGGGCCAATTGGGCCGTCAGAGCATTCATTCCATTGTTCAGATTAATAGGGAATTGGGGAAGAAGACGGCTATGATGGGTAGGTCTGGTAATCGGCCGTTGACGAATTCTTTCTCGAGTTTTTCACATTCAGAGGGCAGTAGCAGAGGTGGAAATCACAGGAAAGACAGGGAGAATGAGGACCCTGCTGTAAAGCTTCAGCTAAAGGTTAGTTGCGCTGAAGCCTTGTGGATGCTTGCGAGAGGAAGTGTGACCAATAGTAGGAAGATAACCGAAACCAAAGGGATGCTTTGTTTGGCTAAGCTTGTTGAGAAGGAACAGGGGGAGCTGCAGTACAATTGCTTGATGACGATTATGGAGATAACAGCTGCAGCCGAGTCCAATGCTGATCTTCGCCGTGCAGCATTCAAGACTAACTCTCCTGCTGCTAAAGCTGTGGTGGAACAACTCTTGAGGATGATTAAGGAGGTGGACAACCCGTCCTTGCGAATTCCAGCCATAAAGTCAATTGGTTCATTAGCCAGGACATTTCCTGCTAGAGAGACTAGAGTAATCGGTCCCCTGGTAACACAGCTGAGTCATAGAAACACAGATGTTGCGGCTGAAGCAGCCATTGCTCTTAACAAGTTTGCTTGTCCAGATAATTTTCTACATGTGGAGCATTCCAAGGCCATAATTGAATTCAATGGAGTCCCGGCACTAATGAGACTGCTAAGGGCCAATGAAATTACACAGTTGCATGGGTTAATTCTCCTATGCTACCTTGCACTACATGCTGGTAACAGCGAATCGTTAGAACAAGCGAGGGTATTGACGGCTCTGGAGGGTGCAGACAGAGCAGTTATAGCACAGCATCCTGAGTTAAGAGAATTAGTGTCCAGAGCATTAATCCACCTCAATCTGTATCATGCAGGGATGAATTCTCAAAGGATAACATATTTGCCTTGA 1848 0.507 MSCYHIWSAEQDMRVIFLLRWRPWRRRSSSNSITKRSESRTNSRTRSWWRSVFARQLTRLTRECPIRHVAAKASKNLDRAPSLVRKCKHRSILRRVVTIISAADFRKVLSYLEASIGDMRWLLSILDADGSAAAAGGGGGIVLSLPPIASNDPILSWVWSFIASVQMGQLNDRVEAANELASLANDNDRNKKIIVEEGGVPPLLKLLKESSSPVAQIAAASALCNLANDLERVRVIVSELGVPIVVQVLADSPMKVQIWVAQLVARMAEHDPVAQEDFARENAIRPLVTLLSFDTFVDDSMGQLGRQSIHSIVQINRELGKKTAMMGRSGNRPLTNSFSSFSHSEGSSRGGNHRKDRENEDPAVKLQLKVSCAEALWMLARGSVTNSRKITETKGMLCLAKLVEKEQGELQYNCLMTIMEITAAAESNADLRRAAFKTNSPAAKAVVEQLLRMIKEVDNPSLRIPAIKSIGSLARTFPARETRVIGPLVTQLSHRNTDVAAEAAIALNKFACPDNFLHVEHSKAIIEFNGVPALMRLLRANEITQLHGLILLCYLALHAGNSESLEQARVLTALEGADRAVIAQHPELRELVSRALIHLNLYHAGMNSQRITYLP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01397 615 PANTHER ARMADILLO REPEAT ONLY 4 57 611 - -
Adu05g01397 615 MobiDBLite consensus disorder prediction 348 362 - -
Adu05g01397 615 Pfam Armadillo/beta-catenin-like repeat 187 227 IPR000225 GO:0005515
Adu05g01397 615 Gene3D - 356 601 IPR011989 -
Adu05g01397 615 MobiDBLite consensus disorder prediction 325 362 - -
Adu05g01397 615 Gene3D - 163 325 IPR011989 -
Adu05g01397 615 SUPERFAMILY ARM repeat 170 599 IPR016024 -
Adu05g01397 615 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 198 241 IPR000225 GO:0005515
Adu05g01397 615 PANTHER ARMADILLO REPEAT ONLY 4 57 611 - -
Adu05g01397 615 SMART arm_5 229 269 IPR000225 GO:0005515
Adu05g01397 615 SMART arm_5 518 557 IPR000225 GO:0005515
Adu05g01397 615 SMART arm_5 186 228 IPR000225 GO:0005515
Adu05g01397 615 MobiDBLite consensus disorder prediction 329 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01397 Adu-Chr5 21565381 21567999 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01397 - - aip:107643314 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01397 05 21565381 21567999 Adu05g01397 05 21565381 21567999 ECH