Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01358 ATGGGAATTCGGTCGGTGTTCGATGCGGGTGAGATGCGAAGAGAATTGGAGAAATGCGGTGTTGATCCTGACAAGTTCCTTCCTCTTGTTTGGAAGCACGTCATCCTCAAATCTAATCACCACTCCGATTGGGACTGGCAGAACCACGCCCCTTCTCTCCCCTCCCCGGCTTACTCTCTTCTCCGCTCCATCCCCCCTCTCTCTTCCTCCCTCCACTCCGTCTTCCACTCCAACGATAACGTCACCTCCAAGCTCCTCATCAAGCTCCATAATGGCGCTTTTGTAGAGGCTGTGATCATGAGGTATGACACTCGTTTGGGCAAATACGCCGGTAAACCCCGTCCCGGTGGTCTACGAGCAACTTTGTGCATATCATCTCAGGTTGGTTGTAAAATGGGTTGCAAGTTCTGTGCAACTGGAACCATGGGATTCAAAAGTAGCTTAACATCTGGAGAAATAGTCGAGCAATTGGTCCACGCCTCTAGGTTTTCACAAATCCGTAATGTTGTCTTCATGGGAATGGGAGAGCCTCTAAACAACTATTCTGCTGTGGTAGAATCCATTCGTGTCATGACTGGATTGCCGTTTCAATTGTCATTGAAAAGGATTACTGTCTCAACGGTTGGCATCATTCATGCTATCAACAAACTTCATAATGATCTGCCTGGTTTGAACTTGGCAGTCTCACTGCACGCACCAGCACAAGACATCAGATGCCAGATCATGCCTGCTGCTCGTGCTTTTCCTTTGCAAAAGCTGATGGCTTCACTGCAAGAATATCAAAGAAACAGTCAGCAGAAGATATTGATCGAGTACATAATGCTTGATGGGGTCAATGATGAAGAGCAGCATGCCCACCAATTGGGAAAACTGCTAGAAACATTTCAAGTGGTGGTGAACTTAATACCTTTCAACTCTATTGGTATGTTGAGTCAATTCAAACCAACTACTGAGCAGAAAGTTTCAGCATTTCAGAAAATTCTTAGAGGTACGTACAATATCCGAACAACAATTCGGAAGCAGATGGGTCAGGACATAAGTGGTGCATGTGGACAATTGGTGGTTAATGTACCCGATAAGTCTCTCGGAAATGCCGAACCACTAACAGACATAGAAGATCTTTTCATTTGA 1131 0.458 MGIRSVFDAGEMRRELEKCGVDPDKFLPLVWKHVILKSNHHSDWDWQNHAPSLPSPAYSLLRSIPPLSSSLHSVFHSNDNVTSKLLIKLHNGAFVEAVIMRYDTRLGKYAGKPRPGGLRATLCISSQVGCKMGCKFCATGTMGFKSSLTSGEIVEQLVHASRFSQIRNVVFMGMGEPLNNYSAVVESIRVMTGLPFQLSLKRITVSTVGIIHAINKLHNDLPGLNLAVSLHAPAQDIRCQIMPAARAFPLQKLMASLQEYQRNSQQKILIEYIMLDGVNDEEQHAHQLGKLLETFQVVVNLIPFNSIGMLSQFKPTTEQKVSAFQKILRGTYNIRTTIRKQMGQDISGACGQLVVNVPDKSLGNAEPLTDIEDLFI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01358 376 Pfam 4Fe-4S single cluster domain 129 213 - -
Adu05g01358 376 ProSiteProfiles Radical SAM core domain profile. 116 345 IPR007197 GO:0003824|GO:0051536
Adu05g01358 376 Pfam Radical SAM superfamily 125 283 IPR007197 GO:0003824|GO:0051536
Adu05g01358 376 CDD Radical_SAM 129 321 - -
Adu05g01358 376 PANTHER 23S RRNA METHYLTRANSFERASE 3 366 IPR040072 -
Adu05g01358 376 PANTHER RADICAL SAM SUPERFAMILY PROTEIN 3 366 - -
Adu05g01358 376 Gene3D Aldolase class I 70 361 IPR013785 -
Adu05g01358 376 SUPERFAMILY Radical SAM enzymes 121 295 - -
Adu05g01358 376 SFLD methyltransferase (Class A) 75 360 - -
Adu05g01358 376 SFLD adenosine C2 methyltransferase (RlmN-like) 75 360 IPR004383 GO:0006364|GO:0008173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01358 - - ccaj:109814608 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01358 05 20534834 20537379 Adu05g01358 05 20534834 20537379 ECH