Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01357 ATGGCGACGGCGACGGAGGGAACCGAAACCAACGACGACGGTGCTCGTCCATGGCAATCCTACCACACTGTTTATACAACTGCCAAAGCAGGAATGGATGGTGTGGACAAGGAGAAAGTACAAAGGACAGTGTATGAAATGAGCAAAGGATCTAAGTATTTTCAGAACGAGGAACGCAAGGACGCTTTTATTACCCAGAAGATCGACAAACTCCGAACTCAATGTGATAAGCTTACCCAAGCAGACCTATCCCATTTTCAGAAGGTAGCTGACCGAAGAATACTTGAGCTAGAAGCTTTGCGGGATCTTTCAAGGATTTGGTTACATGTAGATATGGATGCTTTCTATGCAGCGGTTGAGACTTTAAGTAACCCTACATTAAAGGGCAAGCCAATGGCTGTTGGTAGCATGTCTATGATATCCACTGCCAATTATGAGGCTAGGAAATTTGGGGTTCGTGCTGCTATGCCTGGGTTCATTGCACGTAAACTTTGTCCAGAATTAATATTTGTCCCCACAGATTTCAAGAAGTATACCCATTACAGTGATTTGACCAGAACAGTTTTTCGGAGGTATGATCCCAATTTTATGGCTGCTAGCCTTGATGAAGCATACCTTGATATAACTGAAGTATGCAAAAGAAGGAACATCAAAAGTGAAGAAATTGCGGAAGAACTCCGCACTAGTGTTTATGAAGAGACCGGTCTCACATGTAGTGCAGGAGTGGCACCAAATCGCCTACTTGCCAAGGTTTGCTCAGATATTAACAAGCCAAATGGACAGTATGTCTTACCAAATGATCGTATGGCTGTTATGACCTTCATATCCTCCCTTCCTATCAGAAAGATTGGGGGCATTGGTAAGGTCACTGAACATATTCTGAAGGCTGTATTTGGAATTAACACGTGTGAACAGATGCTGGAGAAGGCTAGCTACCTCTGTGCTCTTTTCTCTCAGTCAACAGCAGACCCAAATTATGTTAGCCTAACAACATATCAGCTATTGAGTTATGCAAAGCTTGTGTTTGCAGCGGAGCTTGCTGAAATACTGTCCACAGACATGCAAAAAGAGGGTCTCTGTGGGCGAACGTTGACTCTTAAACTGAAAACTTCTTCCTTCGAGGTTCGGACTAGAGCCATGACTTTACGAAAGTACATAAGCTCGAGGGAGGATATCTTGAAGCATGCTTCGGAGCTTCTAAAAGCAGAACTTCCTCTTTCAGTAAGATTGATAGGCCTTAGGATGTCACATTTTGATGGAGACAAGTATGGTGGCTCAACATCTAATCCTAAACAAAAGACTATCACCGACTTCATTGCTTCTGTAGATGCCGATAGGAACCATTTTTTGCCAGATGTTGCAGATCATGATTTTGTCAGCCATACAGAGACTAATGTTTCCATTGGCAGTTGCCAAACAAGCAGAGATTCTGCTGATGGGAATCATTCATCTGATGTAAACTGCCAAAGTGGCACTGGCTGGAGTTCAGAGGAGATACAAACATCTGGCAACAATGCTTCATGTTCTAACTATGGCCAAGTTAAAGAAGCGGTGGAATCAACTTTTCCAATTCAGGGACAGTTTGAAGACACTAGTACACTAAATTTGTCTAATCTCCTGGACGATGAGCGACTTAGTTCTTGCGAGGATAAGACAATGTTGTGGTTGAATGACTACAAATGTTCACTTTGTGGAATAGAACTGCCTCCTAGTTTTGTTGAGGAAAGATTAGAGCACTCTGATTTTCATCTTGCCGAAAAGCTTCAAAAGGAAGAATCTCGGATTCACCAAAGAACATCTGTTTCAAGTCGAAGCTGGGATCAGAAGAACAGAATCACTAGAGAAAGCATATCCAAGAAGCAAAAGTTGTCTCAGAAAGAAGGCAGTTACAGACCCATTGATTATTTCTTTTTGTTAAAGAGCAATAAAAACCGTCCCAGTTAG 1944 0.4244 MATATEGTETNDDGARPWQSYHTVYTTAKAGMDGVDKEKVQRTVYEMSKGSKYFQNEERKDAFITQKIDKLRTQCDKLTQADLSHFQKVADRRILELEALRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVGSMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTHYSDLTRTVFRRYDPNFMAASLDEAYLDITEVCKRRNIKSEEIAEELRTSVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRMAVMTFISSLPIRKIGGIGKVTEHILKAVFGINTCEQMLEKASYLCALFSQSTADPNYVSLTTYQLLSYAKLVFAAELAEILSTDMQKEGLCGRTLTLKLKTSSFEVRTRAMTLRKYISSREDILKHASELLKAELPLSVRLIGLRMSHFDGDKYGGSTSNPKQKTITDFIASVDADRNHFLPDVADHDFVSHTETNVSIGSCQTSRDSADGNHSSDVNCQSGTGWSSEEIQTSGNNASCSNYGQVKEAVESTFPIQGQFEDTSTLNLSNLLDDERLSSCEDKTMLWLNDYKCSLCGIELPPSFVEERLEHSDFHLAEKLQKEESRIHQRTSVSSRSWDQKNRITRESISKKQKLSQKEGSYRPIDYFFLLKSNKNRPS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01357 647 Gene3D - 124 172 - -
Adu05g01357 647 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 343 619 - -
Adu05g01357 647 PANTHER DNA POLYMERASE KAPPA 12 323 - -
Adu05g01357 647 CDD PolY_Pol_IV_kappa 108 418 IPR022880 GO:0003887
Adu05g01357 647 Gene3D - 112 262 IPR043128 -
Adu05g01357 647 MobiDBLite consensus disorder prediction 471 495 - -
Adu05g01357 647 PIRSF DNA_pol_eta 428 641 - -
Adu05g01357 647 PIRSF DNA_pol_eta 100 222 - -
Adu05g01357 647 PIRSF DNA_pol_eta 19 86 - -
Adu05g01357 647 PIRSF DNA_pol_eta 319 445 - -
Adu05g01357 647 PIRSF DNA_pol_eta 217 313 - -
Adu05g01357 647 Gene3D - 25 111 - -
Adu05g01357 647 Pfam IMS family HHH motif 270 300 IPR024728 -
Adu05g01357 647 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 12 323 - -
Adu05g01357 647 ProSiteProfiles Zinc finger UBZ3-type profile. 554 591 IPR041298 -
Adu05g01357 647 MobiDBLite consensus disorder prediction 608 626 - -
Adu05g01357 647 ProSiteProfiles UmuC domain profile. 107 287 IPR001126 GO:0006281
Adu05g01357 647 PANTHER DNA POLYMERASE KAPPA 343 619 - -
Adu05g01357 647 MobiDBLite consensus disorder prediction 599 626 - -
Adu05g01357 647 Pfam impB/mucB/samB family 110 254 IPR001126 GO:0006281
Adu05g01357 647 Pfam Ubiquitin-Binding Zinc Finger 558 591 IPR041298 -
Adu05g01357 647 SUPERFAMILY DNA/RNA polymerases 81 322 IPR043502 -
Adu05g01357 647 Gene3D - 263 331 - -
Adu05g01357 647 Gene3D - 334 423 IPR036775 GO:0003684|GO:0006281
Adu05g01357 647 Pfam impB/mucB/samB family C-terminal domain 344 421 IPR017961 GO:0003684|GO:0006281
Adu05g01357 647 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 343 416 IPR036775 GO:0003684|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01357 Adu-Chr5 20529460 20533431 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01357 K03511 - gmx:100816973 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01357 05 20529460 20533431 Adu05g01357 05 20529460 20533431 ECH