Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01117 ATGGCGAAGGAGCTGTTGATCCTCGACAATGGCACAACTTGCTCTTGTTGGAACTACTGTGGCGCTCGACTCGCTGCTGGCTCCGCCGATGGCACCGTTTCCATCTTCGATTTCTGTGACTCCGCTTCTTCTTCCTCTCTTCGCTCCTCTTTCAAATTCAAGGCTCACGAAGGAAATGTCGTGAAGGTTGTTTGGGTTCCTCCTGAATATGGTGATGCGGTTGCTTCTGTTTCTGCTGATGGAGTTGTATCGTTGTGGGAAGAAGTTGCTCAAGATTCACAACCTACTCAATGGAAATTTTGCAAAAGCTTTGGGAGTAGTTCAAGCAAAGTCCTTGATGTTCAATTTGGGACCTCTTTGAATAGTTTGAAAATGGTTGTTGCATGCTCAGATGGTCATGTGAGAGTTTATGAGCTATTGGATCCATTGGAACTGAGAAATTGGCAGCTTCAGGCTGAATTCCAGAATGTCATTGAGTCAGTGTCTGCATTTGGAAAGGCTTTGTGCTTCTCTGCATCCATATCTTGGAACCCGCAAAAAGGTGGAAGCCAAGAATCCAGCTTCCTTATAGGTTTTAATTCCAATACATCCGAGCTTAATTCTTCTAAGGTTTGGGAGTTTGATCAGGCTCACCAGAGATGGTTGCCAGTGGCAGAATTGGCACTGCCAGAGGAAAAGGGTGATCGGGTTTATGCTGCAGCATGGGCACCAAATATTGGCAGGCCATATGAAACTATTGCTGTTGCAACTCAAAAGGGACTTTCAATATGGCACCTTGGATTAAACCCTGATCATAATGGGACACTTCCAGTGGAAAGAGTTGCACTATTGCCAGGACATGAAGGCATGGTGTGGCAGATGGAATGGGATATGAGCGGAATGACGTTGGCTACTACAGGTCACGATGGAATGGTCAGATTATGGCAATCTAACCTCAACGGCATTTGGCATCAGCAAGCTGTGATGGAACCCACTGCTTAG 981 0.4608 MAKELLILDNGTTCSCWNYCGARLAAGSADGTVSIFDFCDSASSSSLRSSFKFKAHEGNVVKVVWVPPEYGDAVASVSADGVVSLWEEVAQDSQPTQWKFCKSFGSSSSKVLDVQFGTSLNSLKMVVACSDGHVRVYELLDPLELRNWQLQAEFQNVIESVSAFGKALCFSASISWNPQKGGSQESSFLIGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEEKGDRVYAAAWAPNIGRPYETIAVATQKGLSIWHLGLNPDHNGTLPVERVALLPGHEGMVWQMEWDMSGMTLATTGHDGMVRLWQSNLNGIWHQQAVMEPTA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01117 326 SMART WD40_4 97 138 IPR001680 GO:0005515
Adu05g01117 326 SMART WD40_4 270 309 IPR001680 GO:0005515
Adu05g01117 326 SMART WD40_4 1 37 IPR001680 GO:0005515
Adu05g01117 326 SMART WD40_4 46 87 IPR001680 GO:0005515
Adu05g01117 326 Gene3D - 9 324 IPR015943 GO:0005515
Adu05g01117 326 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 7 325 IPR037363 GO:0005198
Adu05g01117 326 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Adu05g01117 326 Pfam WD domain, G-beta repeat 13 37 IPR001680 GO:0005515
Adu05g01117 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 309 IPR001680 GO:0005515
Adu05g01117 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 309 - -
Adu05g01117 326 PANTHER NUCLEOPORIN SEH1 7 325 IPR037597 GO:1904263
Adu05g01117 326 SUPERFAMILY WD40 repeat-like 12 309 IPR036322 GO:0005515
Adu05g01117 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 53 87 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01117 K14299 K08237 gmx:100780788 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01117 05 15197797 15200255 Adu05g01117 05 15197797 15200255 ECH