Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01111 ATGAAATCTTTATTTAAAAGCTACATCGACCCTGAAAAGGAAGCGCAGCTGAAAGGAGCTAAAGGAGAAATTCAAGAGAAGGTGAAAAGAATATTGAAACTTGTTAAAGATGAACATCTTGAAGAGGATGATGCTCCATTAGAACTTTCTAAGAAGGAATCACTTGTTAAATTGATAGAGGATTTCCACAGTCAATACCAATCACTCTATGCAAAGTATGATAATCTAACAGATGAGTTGAGGAAAAAGATCATTGGCAAGAAAGGAAAGGAGAGTTTTTCTTCCAGCTCAGACTCGGATTCTGATTATTCTTCAATGGACAAAGACAGCAAAAATGGACAACTGGAAAATGAATTTCAAAAGACAATTAATGGCATGAAGCAAGAACTTCGAACAGCACAGATGGAAGTTGCGGAATTAAATCAGAAGTTGACAGTGACAAGTGAAGAGAAACAGGATCTAATGAAGAAACTTGAAAGTACTGAGAATGAGTCGTCTTCTAAAATAGCAGATTTGTCATCTCAAATAAACAATCTGCTGGCCGAAATGGGTAAACTACATGCTCAGAAAACTGAAACGGAGGAAGAGATGAACAAAGCTACAGCACAAATGATGGTGCTCACTACCCAAGTTAACAACCTGCAAAGAGACTTACTATTGTTGCAGAAAGAGAAAGAAGAACGAGAAAATGCATATGAGAAGTTAAATGAAGAGTATGTGCAAGTAGATAATTGGTATAAGGAATGCAAGGCGAAACTAGAAGCGGCAGAGAAGAAGATCCAAGTAATGACAGAAGAATTTCATGAAGGCATTGGCTCAAAGGACCAGATGATAGCAGATTTGGAACAAACAACAGAAGACTTGAAAAGAGACCTTGAAGAGAAAGGAGATGAAATTAATACTTTACATGAGAATATTAGCATCCTTGAGGTTAAGCTTCGTATGTCAAACCAAAAGCTCCGGGTTGCTGATCAATTGCTAAGTGAGAAAGAGGAGGGCTTCAGGAAAGCAGAAGAGAAGTTCCATAACGATCAGAGATCACTTGAAGAGAGGATTGCCAAATTGTCAGCAACTATTGCTATTCAGGAGGATGCTTATCAGGAAATTGTGTTTGGCATTAAAGAAAGTGTGAACAGTGTGATGACTGGAACCAAAAATATTATGTGGAAATTTGAGGATGAGTGTAAAAATTATGAGAACTATATCTCAAACATGTCACATGAGCTTCACATTGCAAGGAACTTTGTCAGGGAGATGAACAAGGAAAAAGTGCAACTGAAGGAGAAAATAAACCATTTGGAGGAGCAACTACAGGATAAAAAGAAGCAGGAGTTGGATTTGAGGCAGATGGTGAAGAAGTTAGATGAAAAGGCAAGAGAGGAGGAACTAGCGAAGAAGAATCTAAGGACAAATGTTTTTCAACTTGAGAATACTATTGGAGAGCTACAAAAATTGGTGAAAGAGAAAGACCAAGGTATATTGAAGTTGGCTGAGGAGAAGAGGGAGGCCATTAGGCAGCTGTGTCTGGGAATCGATTATCATCGCAGTCGTTATAACACTCTCATGGACGTTGTATCAAGGACTCGCAGAGGCTAG 1596 0.3847 MKSLFKSYIDPEKEAQLKGAKGEIQEKVKRILKLVKDEHLEEDDAPLELSKKESLVKLIEDFHSQYQSLYAKYDNLTDELRKKIIGKKGKESFSSSSDSDSDYSSMDKDSKNGQLENEFQKTINGMKQELRTAQMEVAELNQKLTVTSEEKQDLMKKLESTENESSSKIADLSSQINNLLAEMGKLHAQKTETEEEMNKATAQMMVLTTQVNNLQRDLLLLQKEKEERENAYEKLNEEYVQVDNWYKECKAKLEAAEKKIQVMTEEFHEGIGSKDQMIADLEQTTEDLKRDLEEKGDEINTLHENISILEVKLRMSNQKLRVADQLLSEKEEGFRKAEEKFHNDQRSLEERIAKLSATIAIQEDAYQEIVFGIKESVNSVMTGTKNIMWKFEDECKNYENYISNMSHELHIARNFVREMNKEKVQLKEKINHLEEQLQDKKKQELDLRQMVKKLDEKAREEELAKKNLRTNVFQLENTIGELQKLVKEKDQGILKLAEEKREAIRQLCLGIDYHRSRYNTLMDVVSRTRRG 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01111 531 Coils Coil 246 266 - -
Adu05g01111 531 MobiDBLite consensus disorder prediction 148 169 - -
Adu05g01111 531 Coils Coil 116 164 - -
Adu05g01111 531 MobiDBLite consensus disorder prediction 87 115 - -
Adu05g01111 531 PANTHER COP1-INTERACTIVE PROTEIN 1 1 154 - -
Adu05g01111 531 PANTHER COP1-INTERACTIVE PROTEIN 1 152 228 - -
Adu05g01111 531 PANTHER COP1-INTERACTIVE PROTEIN 1 222 529 - -
Adu05g01111 531 MobiDBLite consensus disorder prediction 149 164 - -
Adu05g01111 531 Coils Coil 59 79 - -
Adu05g01111 531 Coils Coil 274 305 - -
Adu05g01111 531 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 80 IPR011684 GO:0003779
Adu05g01111 531 Coils Coil 416 502 - -
Adu05g01111 531 Coils Coil 345 365 - -
Adu05g01111 531 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 261 323 IPR000727 -
Adu05g01111 531 Coils Coil 169 241 - -
Adu05g01111 531 Gene3D - 195 377 - -
Adu05g01111 531 Pfam KIP1-like protein 5 74 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01111 Adu-Chr5 15081880 15083621 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01111 - - aip:107643113 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01111 05 15081880 15083621 Adu03g02676 03 95882103 95883212 PCT