Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01087 ATGACAATGGTGGTGTATGGCGTATTAATGTTGTGGTGTGCAATAGTTGGGCTTGCCATGAGGCCCGGGGTGATGGAGGATCAGACGCCGCTAAGGTCGTCATCATCAGCAGCTAATAGTAGTAGTTATGACTACGCAGATGCTCTGGAAAAGGCTATCTTATTCCTTGAAGGACAACGTTCAGGACAGTTGCCGTCCAATCAAAGAGTCACCTGGAGAGCAGACTCAGCTCTCTCTGACGGCAAACTTCAAAATTTGGATTTGACCGGAGGATATTATGACGCTGGTGATAATGTGAAGTTTGGATGGCCAATGTCATTTACAGTGACGTTATTGAGTTGGGCAAATATTGAGTATCAGACTCAGAAACAGACTGATCAAAACCTCCAAAGTGCAATCCGCTGGGGCACTGATTTCATACTCAAAGCCCACACTTCGCCGACTACGCTCTTCACACAGATCGGAGATGGGAACGCCGATCACCAATGTTGGGAGCGCCCAGAGGACATGGATACTCCAAGAACACTCTACAAGATTGATTCTTCTTCCCCTGGAACCGAGGCTGCTGCTGAATCTGCTGCTGCTCTTGCTGCTGCCTCCATTGCCTTCAAGAAAACAGATCCCGCTTATTCATCAACCCTATTAACCCACTCTAAATCACTGTTAGATTTTGCTGACAAGTATAGAGGATCGTACTCGCTTTCTTGCCCATTCTACTGCTCCTACTCAGGTTACCAGGATGAACTGTTATGGGCGGCGTCTTGGCTATACAAGGCCACCGGAGAAAGCCAGTATTTGAACTATATTACTTCTAACCAAGGATGGAGTCATGCCGTAAATGAGTTCAGCTGGGATAACAAATTTATTGGAGCTCAAACAATACTCACCCAGGAATTTTATGAGGGGAAGAATGAACTGGGCAAGTTTAAGAGTGACGCTGAATCATTTGTATGCGCAGTGATGCCAGGAAGTAGCTCTCAACAGATTAAGACGACTCCCGGCGGTCTATTGTATACTAGAGACAGTAGCAACTTGCAATATACAACAAGCTCAACCATGGTGCTATTCATTTTCTCCAAAATCCTAAGCAGGAACAACGTCAGTGGAATCCAGTGTGGCTTTTCACATTTCACTGCCCCCCAAATTAGAGACTTTGCAAAAACACAGGTGGACTACATACTGGGAAAGAATCCAATGAGTATGTCGTACATGGTTGGATTTGGCAGTAACTACCCAAAGAAATTACACCACAGAGGCTCATCAATCCCTTCAATCAAAGATCAGCAGGGAAAAGTGGGGTGCAGCGATGGTATGTCAAACTATTACAATTCACCAAATCCAAATCCCAATACTCACGTTGGTGCCATTGTTGGAGGCCCTGATTCCAATGACCACTTCGGTGATGAAAGATCTGACTATTCTCACAGCGAACCTACAACCTATATTAATGCTGCTTTCGTCGGTTCCGTCGCTGCTTTGCTTGCTGAATGA 1491 0.4554 MTMVVYGVLMLWCAIVGLAMRPGVMEDQTPLRSSSSAANSSSYDYADALEKAILFLEGQRSGQLPSNQRVTWRADSALSDGKLQNLDLTGGYYDAGDNVKFGWPMSFTVTLLSWANIEYQTQKQTDQNLQSAIRWGTDFILKAHTSPTTLFTQIGDGNADHQCWERPEDMDTPRTLYKIDSSSPGTEAAAESAAALAAASIAFKKTDPAYSSTLLTHSKSLLDFADKYRGSYSLSCPFYCSYSGYQDELLWAASWLYKATGESQYLNYITSNQGWSHAVNEFSWDNKFIGAQTILTQEFYEGKNELGKFKSDAESFVCAVMPGSSSQQIKTTPGGLLYTRDSSNLQYTTSSTMVLFIFSKILSRNNVSGIQCGFSHFTAPQIRDFAKTQVDYILGKNPMSMSYMVGFGSNYPKKLHHRGSSIPSIKDQQGKVGCSDGMSNYYNSPNPNPNTHVGAIVGGPDSNDHFGDERSDYSHSEPTTYINAAFVGSVAALLAE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01087 496 Pfam Glycosyl hydrolase family 9 45 488 IPR001701 GO:0004553|GO:0005975
Adu05g01087 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 392 418 IPR018221 -
Adu05g01087 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 466 484 IPR033126 -
Adu05g01087 496 PANTHER ENDO-1,4-BETA-GLUCANASE 9 495 - -
Adu05g01087 496 Gene3D - 39 496 IPR012341 GO:0005975
Adu05g01087 496 SUPERFAMILY Six-hairpin glycosidases 42 495 IPR008928 GO:0005975
Adu05g01087 496 PANTHER ENDOGLUCANASE 18-RELATED 9 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01087 Adu-Chr5 14674942 14678017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01087 44 495 Glycoside Hydrolase AT4G23560 70.330 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01087 - - aip:107640241 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01087 05 14674942 14678017 Adu05g01087 05 14674942 14678017 ECH