Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01012 ATGGCATCTTCAGCAAGGAAGCTTGAGCTTCTCTGGTTCATTCTTATCTTCATTTGGGTTCCATCTTCATCATCACAGACACTTGTTATGCCCCTCACACATTCAATCTCCAAAGAGCAATTCAACAGTACCCACAACCTCCTCAAATCCACTTCCACCCGTTCCGCCGTCCGCTTCCACCACCAACGCCAACGTCATCGCCAGCACCAAGTTTCCCTTCCTCTCTCCCCTGGAAGCGACTACACCTTGTCCTTCACCCTGGGCTCTGGCCCGGCCCAGGCCCATCCCATAACCCTCTATATGGACACAGGCAGCGACCTTGTCTGGTTCCCCTGTGCCCCCTTCGAGTGCATACTCTGCGAGGGAAAGCCCAGCCCAGGCCCAAGCAGGCCACCAAACATCACACGGGCCCACGCAGTGTCATGCCAGTCACCTGCATGCTCCGCGGCCCACTCCTCCACGTCATCATCCGACCTCTGCGCAATGGCACGTTGCCCCTTAGACGCCATAGAAACTTCTGATTGCAGTTCATCGGCGTGTCCGCCATTCTACTACGCTTACGGCGACGGAAGCTTAATCGCAAACCTCTATCGCCACACACTCTCTATGTCTTCTCTCGTTCTCAAGAACTTCACCTTCGGTTGCGCCCACACCACCCTCGGTGAGCCCACCGGCGTCGCTGGTTTCGGCCGTGGTTTGCTCTCTTTTCCGGCCCAGTTAGCCACCTTCTCTCCTCAGCTCGGTAATCGATTCTCATACTGTTTGGTATCTCATTCTTTCAACGGCGATCGAATTCGTCGCCCGAGTCCACTCATTCTCGGCCGTCGCGACGGCGGGGACGAACACGGTGAGTTCGTGTACACGTCCCTGCTTCGGAACCCGAAGCACCCGTACTTTTACTCCGTCGGGCTAGCTGGAATCTCAGTCGGGAAGAGGGATATTCCGGCGCCAGAGATACTGAGGAAGGTGGACGCGACAGGGAGTGGTGGTGTTGTAGTTGATTCCGGGACGACGTTCACGATGTTGCCAGCGAGTTTGTATAACTCGGTGGTGGCTGAGTTCGACCGGCGAGTGGGGCGAATTCACAAGCGGGCGAGTGAGGTGGAGGGGAAAACGGGTCTGGGTCCATGTTATTACTTGGACACTGTGGCCCAGGTTCCGGCGGTGACGTTGCGTTTTGCGGGGAATGATTCGAGTGTGGTGCTGCCTCGAAGGAACTACTTCTACGAGTTTTTGTACGGTGAAGATGGAGCCACGACGAAAAGAAGAGTGGGGTGCATGATGCTGATGAACGGTGGTGATGATTCTGAGTTAAGTGGTGGACCCGGGGCCACGCTTGGGAATTACCAGCAGCAGGGCTTTGAGGTTATTTACGACCTTGAAAAGCAGCGCGTGGGATTCGCCAGAAGGCAGTGCGCGTTGCTTTGGGATAGCCTGAACCGTGAGAAGAACTAG 1455 0.5581 MASSARKLELLWFILIFIWVPSSSSQTLVMPLTHSISKEQFNSTHNLLKSTSTRSAVRFHHQRQRHRQHQVSLPLSPGSDYTLSFTLGSGPAQAHPITLYMDTGSDLVWFPCAPFECILCEGKPSPGPSRPPNITRAHAVSCQSPACSAAHSSTSSSDLCAMARCPLDAIETSDCSSSACPPFYYAYGDGSLIANLYRHTLSMSSLVLKNFTFGCAHTTLGEPTGVAGFGRGLLSFPAQLATFSPQLGNRFSYCLVSHSFNGDRIRRPSPLILGRRDGGDEHGEFVYTSLLRNPKHPYFYSVGLAGISVGKRDIPAPEILRKVDATGSGGVVVDSGTTFTMLPASLYNSVVAEFDRRVGRIHKRASEVEGKTGLGPCYYLDTVAQVPAVTLRFAGNDSSVVLPRRNYFYEFLYGEDGATTKRRVGCMMLMNGGDDSELSGGPGATLGNYQQQGFEVIYDLEKQRVGFARRQCALLWDSLNREKN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01012 484 Pfam Xylanase inhibitor N-terminal 81 259 IPR032861 -
Adu05g01012 484 Gene3D Acid Proteases 277 476 IPR021109 -
Adu05g01012 484 PANTHER ASPARTYL PROTEASES 10 481 IPR001461 GO:0004190|GO:0006508
Adu05g01012 484 CDD pepsin_A_like_plant 81 472 IPR034161 -
Adu05g01012 484 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 481 - -
Adu05g01012 484 Gene3D Acid Proteases 58 265 IPR021109 -
Adu05g01012 484 ProSiteProfiles Peptidase family A1 domain profile. 81 468 IPR033121 -
Adu05g01012 484 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 331 342 IPR001969 GO:0004190|GO:0006508
Adu05g01012 484 Pfam Xylanase inhibitor C-terminal 300 468 IPR032799 -
Adu05g01012 484 SUPERFAMILY Acid proteases 76 477 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01012 Adu-Chr5 13436969 13438819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01012 50 475 Miscellaneous Gene Families AT1G77480 25.991 1.09e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01012 - - adu:107488223 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01012 05 13436969 13438819 Adu05g01012 05 13436969 13438819 ECH