Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01011 ATGAGCAGTGTGAAGGGAAAGGAGAAAGAGAAGGATGTGGAAGTTGTAATAACAACAAGAGGTGACACTGAATCATTAACTACTTATTCTTCTTCTTCTGGTGAGAGAGCGTGGTTGCATTCTGCTGATGGTAGAACTAAATGTCTTCATCCCCCTATTGAAACGCATTGGGAACTCCCTTCATCAGGTGCCAAGAAGCCTTCTTCTTCGTCATCATCAAGCTTCAAGTCACTCTTCACCTTCCCTCTCACCAAACTCAGAAGGACCAAGAGCATGCAAACCGTTCTAGAAGGACCTCGCGATCCAAAAGATGCCCAGATTGTTGAGTCCTTCCGCAGAATGCTCTTTCTTGAGGGTCTCTTACCCACCAAGCACAATGATTATCATACTCTTTTGAGGTTTCTTCGCATGAGAGATTTTGACATGTTGAAATCCAAAGACGTATTTCTCAATTATCTGAAATGGCACGAGGAATTTGGAGTAGACATGCTTCTTAAGGAATTCAAATACCCGGAGTACACAGAAGTAAAGAAATGCTATCCTCATGGATACCATGGGGTTGATAGACATGGCAGACCAGTATACATTGAGAGACTTGGGATGGTAGACCTTAACAAGCTGCTGCAAGTAACCACATTTGAGAGGTTCATAAAGTATCATGTGTCAGAACAAGAGAAAACATTGAGAATAAGATACCCTGCATGTTCCATGGCAGCTAAAAGGCACATAGCATCCACTACAAGTATCTTGGATGTTAATGGAGTAGGAATGTCTAATTTCTCAAAGCCAGCAAGGTACCTCTTTATGGAAATTCAGAAGATCGATAGTAGTTACTATCCTGAGACTCTTCATAAGCTCTTTATTATCAATGCTGGATCCGGCTTCAAAATGCTATGGAAAGCCGTTAAGACATTCCTAGATGTTCGCACAGTAGCAAAAGTTCAAGTGTTAGGTTCTAATTATCTTAGTGTGTTACTTGAGGCTATTGATATAAGTAATTTGCCAAGTTTTTTGGGTGGTAAATGCACATGTTCTGATTATGGAGGATGCTTAATGAGTGATAGAGGTCCATGGAAAAATCCAGATATAGTAAAAATGATTGAGGTCATATCCTTGAGAGAAGAGATGGATAGTAAAAATGATTCAAATAATGGTGATGTGGCTTCAGAAGATTCTCCCTCGATGCCCAAAAAGGGTGACATGGGAAACCAAAATGACTTTGGTTTTAACCTAGCTCCACTTGATGAGTCAGCATGTGCTGGATCAGACTCAAAATATAAGTTAGCATTGCAAAAAATTAATGGCCTGGAAGCTGCTCTTGGAGACACCAAGAATAAAATCGAGACACTGGAAGAGGCACTTGAGGACGCCAAGATGGCCTTGAAAGAGCTCGCACAAAGTATAATACAGCCGAAGCTATGA 1422 0.4093 MSSVKGKEKEKDVEVVITTRGDTESLTTYSSSSGERAWLHSADGRTKCLHPPIETHWELPSSGAKKPSSSSSSSFKSLFTFPLTKLRRTKSMQTVLEGPRDPKDAQIVESFRRMLFLEGLLPTKHNDYHTLLRFLRMRDFDMLKSKDVFLNYLKWHEEFGVDMLLKEFKYPEYTEVKKCYPHGYHGVDRHGRPVYIERLGMVDLNKLLQVTTFERFIKYHVSEQEKTLRIRYPACSMAAKRHIASTTSILDVNGVGMSNFSKPARYLFMEIQKIDSSYYPETLHKLFIINAGSGFKMLWKAVKTFLDVRTVAKVQVLGSNYLSVLLEAIDISNLPSFLGGKCTCSDYGGCLMSDRGPWKNPDIVKMIEVISLREEMDSKNDSNNGDVASEDSPSMPKKGDMGNQNDFGFNLAPLDESACAGSDSKYKLALQKINGLEAALGDTKNKIETLEEALEDAKMALKELAQSIIQPKL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01011 473 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 172 346 IPR001251 -
Adu05g01011 473 Coils Coil 433 467 - -
Adu05g01011 473 MobiDBLite consensus disorder prediction 377 402 - -
Adu05g01011 473 SMART CRAL_TRIO_N_2 127 152 IPR011074 -
Adu05g01011 473 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 42 468 - -
Adu05g01011 473 SUPERFAMILY CRAL/TRIO domain 171 367 IPR036865 -
Adu05g01011 473 Pfam CRAL/TRIO domain 180 340 IPR001251 -
Adu05g01011 473 Gene3D - 80 159 - -
Adu05g01011 473 CDD SEC14 173 341 IPR001251 -
Adu05g01011 473 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH11 42 468 - -
Adu05g01011 473 SMART sec14_4 172 343 IPR001251 -
Adu05g01011 473 Gene3D - 160 371 IPR036865 -
Adu05g01011 473 SUPERFAMILY CRAL/TRIO N-terminal domain 98 167 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01011 Adu-Chr5 13423379 13425767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01011 131 337 Acyl Lipid Metabolism Gene Families AT5G47730 28.708 1.66e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01011 - - aip:107643040 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01011 05 13423379 13425767 Adu05g01011 05 13423379 13425767 ECH