Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01010 ATGAGCACCGGCGAGCTTCTTAGCATCGAGCCTCTCGAGCTCAAGTTCTTCTTTGAGCTGAAGAAGCAGATCTCATGCTCTCTTCAATTGTCAAATAAGACCGATAGCTATGTTGCTTTCAAGGTGAAAACAACCAATCCTAAGAAATATTGTGTTCGTCCAAACACTGGAATTGTCATGCCGCGATCTACGTGTGATGTTACAGTTACCATGCAAGCGCAAAAGGAAGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAAAGCGTAAAAGCACCTGATGGAACAACTCCAAAGGATATCACTGCTGAAATGTTCAACAAGGAAGCAGGACATTTGGTTGAGGAGTGCAAATTGAGAGTGGTGTATCTGGCCCCAACTCAACCACCGTCTCCAGTCGCAGAAGGTTCTGAGGAAGGGTCATCACCTAGAGGCTCTATCTCTGAGAATGGAAATTTCACTGGTCCTGACTCCACACCAGTAACAAGGGCTTTTGCTGAACGATCAGATGTTCCAGAAAAATCTGCAGAGGCAAAAGCTCTTATTGCAAGGCTTACTGAAGAAAAGAATAATGCATTGCGACAAAATAGCAAGCTTAATCAGGAACTGGAGCTGCTGAAACGTGAAAGCAGCAAAAGTCGTGGGGGCGTCTCGATGGTCATTGTCATATTAATTGGTTTGCTTGGCATAATAATGGGGTATCTCATGAAAAAGGCCTAA 726 0.4421 MSTGELLSIEPLELKFFFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDVTVTMQAQKEAPPDMQCKDKFLLQSVKAPDGTTPKDITAEMFNKEAGHLVEECKLRVVYLAPTQPPSPVAEGSEEGSSPRGSISENGNFTGPDSTPVTRAFAERSDVPEKSAEAKALIARLTEEKNNALRQNSKLNQELELLKRESSKSRGGVSMVIVILIGLLGIIMGYLMKKA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01010 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Adu05g01010 241 MobiDBLite consensus disorder prediction 130 163 - -
Adu05g01010 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Adu05g01010 241 MobiDBLite consensus disorder prediction 143 161 - -
Adu05g01010 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Adu05g01010 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Adu05g01010 241 Coils Coil 177 211 - -
Adu05g01010 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Adu05g01010 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Adu05g01010 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01010 Adu-Chr5 13399683 13403300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01010 - - gmx:100791280 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01010 05 13399683 13403300 Adu05g01010 05 13399683 13403300 ECH
Adu05g01010 05 13399683 13403300 Adu01g01436 01 37335295 37344131 PCT