Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00963 ATGACATCAAAGGGAGGATATGTGGTATTCTGGTGGATGAAGTGCCATTGCAAGGAGTCGTTCAAGGCAAAGGAGGTCTCTTCTGGGGTTCCGTCATCCCCTGCGCCCTCTTCTACTTCTTCCAGCTCTACTTCAAGAACCGCCGCCACCACCACCGTTCTCCTCCTCCTCCGCCACCACCACCACCACCAACATCATGTCCAAGTCTTGCCCCGCTCTCTTTCCAGGATCCTTCTGTCTCCCAGAAGCCCTGCCGGACCCGCTTACGTGTCAGGCCGCGCCACCTCTGTCGCCAGAATCTCCGCTGACTCTCCTTACTATGTTGGTTTGCGCAAGGCGGCTGAGGATCCCTACCACGAGGTTCATAATCCTCATGGTGTTATTCAGCTTGGTTTGGCACATAACACGTTGTCTCAGGACTTGGTCCACGATTGGATTCACCAGAATGGAACCACTGCAATTTTAGGCAGAGGAATTGCACCTTACCAACCCCTTGATGGATTCATGGAACTCAAACTGGCTGTGGCTGGTTTCATGCCTCAAGTTATGGAAAAGCCAATTTTCTTCAGTCCCTCACAAATGGTACTAACTGCTGGTGCCACCTCTGCCATTGACATTCTTAGCTTCTGCTTAGCAGATCATGGAAATTCATTCCTTGTTCCAACACCTCACAGCCCTAGCTTTGATGGGGATATAAAATGGCGAAGTGACATCGAGATAGTAGCTGTTCCCTGCCGCAGCACTGATAACTTCAATCTGAGTATAACTGCTCTTGACCGGGCCTTTAACCAGGCAAAGAAACGGGGACAAAAAGTTCGAGGAATCATCATAACGAATCCTTCAAATCCTGTTGGAAAATTATTGGACCGGGAAACACTACTTGATATTGTGGACTTTGCTAGAGAGAAGAATATCCACATAGTCTCCAATGAAACATTTGCAGGGTCTGCTTGTGGAAGCAAAGAGTTTGTGAGCATGGTGGAAATCCTGGAAGCCGAAGAACTTGATCGCGACAGAGTTCATATAATATATAGTTTATCAAATGAACTCTCTGTTCCAGATTTTAAGGTTGGTGTCCTCTACTCCTACAATGAGAACGTCCTAGTTGCTGCTAGAAGAATGGCAAAGTTCTCAGCTCTTTCTGCTCCCACTCAGCAATTGCTTATCTCCATTCTTTCAGATACTAGATTTGTACAGAAATTCATTGAGATCAACAGACTGAGGCTTCGAAAAATGTATAACACATTTGTGGCAGAATTGAAGCAGTTAGGAATCGAGTGCACTAGCAGCAGCGGTGGTTTTTACTGTTGGGCCAACATGAGTAAATTACTCCGGTCTTACGGCGAAAAGGGAGAGCTTGAGCTCTGGGACAGATTGTTGAATGTGGCTAAGATCAATGTTACTCCAGGATCATCTTGTCACTGTATTGAACCAGGATGGTTTCGTTTTTGTTTCACTACATTGTCTGAAAAAGATGTTTCTGTAGTCATGGAACGGATTCGGCGAATCTCTGCAGCCACAAAATCAGAGAGTTGA 1536 0.4635 MTSKGGYVVFWWMKCHCKESFKAKEVSSGVPSSPAPSSTSSSSTSRTAATTTVLLLLRHHHHHQHHVQVLPRSLSRILLSPRSPAGPAYVSGRATSVARISADSPYYVGLRKAAEDPYHEVHNPHGVIQLGLAHNTLSQDLVHDWIHQNGTTAILGRGIAPYQPLDGFMELKLAVAGFMPQVMEKPIFFSPSQMVLTAGATSAIDILSFCLADHGNSFLVPTPHSPSFDGDIKWRSDIEIVAVPCRSTDNFNLSITALDRAFNQAKKRGQKVRGIIITNPSNPVGKLLDRETLLDIVDFAREKNIHIVSNETFAGSACGSKEFVSMVEILEAEELDRDRVHIIYSLSNELSVPDFKVGVLYSYNENVLVAARRMAKFSALSAPTQQLLISILSDTRFVQKFIEINRLRLRKMYNTFVAELKQLGIECTSSSGGFYCWANMSKLLRSYGEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFRFCFTTLSEKDVSVVMERIRRISAATKSES 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00963 511 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 269 293 - -
Adu05g00963 511 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 130 156 - -
Adu05g00963 511 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 305 328 - -
Adu05g00963 511 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 371 394 - -
Adu05g00963 511 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 193 213 - -
Adu05g00963 511 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 339 363 - -
Adu05g00963 511 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 215 236 - -
Adu05g00963 511 CDD AAT_like 162 502 - -
Adu05g00963 511 SUPERFAMILY PLP-dependent transferases 104 503 IPR015424 -
Adu05g00963 511 Pfam Aminotransferase class I and II 128 500 IPR004839 GO:0009058|GO:0030170
Adu05g00963 511 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 58 505 - -
Adu05g00963 511 PANTHER AMINOTRANSFERASE ACS12-RELATED 58 505 - -
Adu05g00963 511 Gene3D - 150 394 IPR015421 GO:0003824
Adu05g00963 511 MobiDBLite consensus disorder prediction 26 46 - -
Adu05g00963 511 Gene3D Aspartate Aminotransferase, domain 1 116 499 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00963 Adu-Chr5 12357254 12359904 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00963 K14270 - gmx:100783490 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00963 05 12357254 12359904 Adu05g00963 05 12357254 12359904 ECH