Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00952 ATGGACCATTCGAATACTGTTCCTCCTTCTCCATCTTCTTCTTCTTCTCCTTCTTCTTCTTTTTCCTCTCATCGCGTGGAGCGAATGATAAACTCGAACCACTACAAGTCCCCTTCGAGAACAATCTGCTCCGACAGGTTCATACCCCCTTACTCTTCCCTCCTCCGCACGGCGCTATTCGGACCCGATGCACCGCTCACGCCCGATAAGACCAGCCACAACATTTTTCGTTACAAGACGGAGACTCGCCAGTCCATGCACTCTCTCTCCCCCTTCATCCACAATGACGACGTAGTTTCCACTGTTAATCATACCCCTGTTAAGCCTCCCAGGAAAATTCCCCGTTCACCATACAAGGTTCTGGATGCGCCTGCGTTGCAAGATGATTTTTATTTGAACCTCGTGGATTGGTCTTCGCTCAATGTTTTGGCTGTTGGTCTTGGTAACTGCGTTTATTTGTGGAATGCTTGTAGCAGCAAGGTAACTAAATTGTGTGACTTGGGGAATGATGATTGCGTTTGTTCTGTTGGGTGGGCTCAGCGCGGTACACTCCTTGCTGTTGGAACTAATAGTGGTCAAGTTCAGATTTGGGATGCATCTCAATGCAAGATGATAAGAACTATGGAAGGTCATCGTTTACGAGTTGGGGCCTTGGCCTGGAGTTCATCTCTTTTATCTTCTGGTGGCAAGGATAAAAATATTTATCAAAGAGATATACGTGCACAAGATGATTTTGTCAGTAAACTGTCCGGGCACAAGTCAGAGGTTTGTGGACTGAAGTGGTCTTATGATAACCGTGAGTTAGCATCTGGAGGAAATGATAACAGATTGCTTGTTTGGAATCAACACTCAACTCAACCCGTCCTGAAGTACTGTGAACACACGGCAGCTGTTAAAGCAATAGCGTGGTCTCCTCATGTTCATGGACTCCTTGCATCTGGAGGAGGAACTGCAGATCGATGTATTCGTTTCTGGAATACAACCACAAACTCACACTTAAGCTGTATGGACACTGGAAGTCAGGTTTGCAATCTTGCCTGGTCTAAGAATGTTAATGAACTGGTAAGCACACATGGCTACTCCCAGAACCAGATAATAGTTTGGAGATACCCCACCATGTCTAAGCTCGCAACTCTTACAGGCCATACTTATAGAGTTCTCTATCTTGCCATCTCTCCAGATGGGCAGACTATTGTCACTGGTGCTGGAGATGAAACACTTAGGTTTTGGAACGTATTCCCTTCCTTAAAATCACAGAATACTGAGAGTGAAATTGGAGCATTATCTTTTGGGAGAACAATTATTAGCTCTTCAGGGAGCTATGAAGTTGCAACAAGATTGCTAGTGGTGGAAAATCCATGCCATCGATGGCAAGTCTCGAGCACCTTAGATTTATTTGTACATGTTAAGGGAGGAGCTATAGAGGAATGCAAGTATCAGATAAAAGGAATGGAATCAGATTTTGTGCGTGTCCTTTTTAATTTTGGTCTTACCACAAGTTTTTTCTTTTAG 1512 0.4444 MDHSNTVPPSPSSSSSPSSSFSSHRVERMINSNHYKSPSRTICSDRFIPPYSSLLRTALFGPDAPLTPDKTSHNIFRYKTETRQSMHSLSPFIHNDDVVSTVNHTPVKPPRKIPRSPYKVLDAPALQDDFYLNLVDWSSLNVLAVGLGNCVYLWNACSSKVTKLCDLGNDDCVCSVGWAQRGTLLAVGTNSGQVQIWDASQCKMIRTMEGHRLRVGALAWSSSLLSSGGKDKNIYQRDIRAQDDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLLVWNQHSTQPVLKYCEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLAWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSLKSQNTESEIGALSFGRTIISSSGSYEVATRLLVVENPCHRWQVSSTLDLFVHVKGGAIEECKYQIKGMESDFVRVLFNFGLTTSFFF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00952 503 MobiDBLite consensus disorder prediction 1 25 - -
Adu05g00952 503 PANTHER PROTEIN FIZZY-RELATED 1 8 61 - -
Adu05g00952 503 ProSiteProfiles Trp-Asp (WD) repeats profile. 166 207 IPR001680 GO:0005515
Adu05g00952 503 Pfam Anaphase-promoting complex subunit 4 WD40 domain 162 222 IPR024977 -
Adu05g00952 503 Gene3D - 107 415 IPR015943 GO:0005515
Adu05g00952 503 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 379 412 - -
Adu05g00952 503 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 51 435 IPR033010 GO:0010997|GO:0097027|GO:1904668
Adu05g00952 503 ProSitePatterns Trp-Asp (WD) repeats signature. 398 412 IPR019775 -
Adu05g00952 503 PANTHER PROTEIN FIZZY-RELATED 1 51 435 - -
Adu05g00952 503 Pfam WD domain, G-beta repeat 246 281 IPR001680 GO:0005515
Adu05g00952 503 Pfam WD domain, G-beta repeat 286 326 IPR001680 GO:0005515
Adu05g00952 503 Pfam WD domain, G-beta repeat 375 411 IPR001680 GO:0005515
Adu05g00952 503 SMART WD40_4 114 155 IPR001680 GO:0005515
Adu05g00952 503 SMART WD40_4 158 198 IPR001680 GO:0005515
Adu05g00952 503 SMART WD40_4 328 369 IPR001680 GO:0005515
Adu05g00952 503 SMART WD40_4 284 326 IPR001680 GO:0005515
Adu05g00952 503 SMART WD40_4 372 411 IPR001680 GO:0005515
Adu05g00952 503 SMART WD40_4 201 238 IPR001680 GO:0005515
Adu05g00952 503 SMART WD40_4 242 281 IPR001680 GO:0005515
Adu05g00952 503 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 249 281 - -
Adu05g00952 503 SUPERFAMILY WD40 repeat-like 117 412 IPR036322 GO:0005515
Adu05g00952 503 ProSiteProfiles Trp-Asp (WD) repeats profile. 249 290 IPR001680 GO:0005515
Adu05g00952 503 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 8 61 IPR033010 GO:0010997|GO:0097027|GO:1904668
Adu05g00952 503 ProSiteProfiles Trp-Asp (WD) repeats profile. 379 412 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00952 Adu-Chr5 12203265 12208616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00952 184 423 Miscellaneous Gene Families AT5G08390 20.492 7.21e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00952 K03364 - gmx:100780928 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00952 05 12203265 12208616 Adu05g00952 05 12203265 12208616 ECH