Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00886 ATGGACCAACCGCTACAACAACAACAAACCACCACCGCCGAGGTCGTTAGGGATTCCGATTCGCAGCTTTCTGGAGTTCCCTCCGATGCTAACGTGGCCGAGAGAATAGCGGCCTCTGCCTGCGCTCCCAACTCGGAGGTCGCCGTGCCGGACGCCGCTGGTTTGAAGAGGAAGCGCGGTCGTCCGGCCAGGGGGGTTCCGAGAGCCACGCCGGCTCCTGCTCCGGTTAGGCAGAAGAAGGAGGAGGAGGATGTTTGCTTCATATGCTTCGATGGCGGAAGCCTCGTTCTCTGTGATCGCCGGGGTTGTCCTAAAGCGTATCATCCTGCTTGTATTAAGCGAGACGAAGCCTTCTTTCGTTCAAAGGCCAAATGGAATTGCGGTTGGCATATATGTAGCGTTTGTCAGAAGGGATCCCATTATATGTGCTATACTTGTACGTATTCTTTGTGCAAGGGATGTACAAGAGATGCTGATTTTGTTAGTGTAAGAGGAAATAAAGGATTCTGTGGAATGTGCATGAAAACTATAATGCTGGTTGAGAACCCTGGTCAGGAAAATAAGTGTGAAGTTGATTTTGATGACAAAACCAGCTGGGAGTATCTTTTCAAGATCTATTGGGTGTGTTTGAAAGAGAAGCTATCTTTGACAGTAGATGAGCTCCGCCAAGCTAAAAAACCGTGGAAAAGTGCTACTCCTTTAAGTTGTAAGGTTGAAACTCCCCATCAACTTTATCATCTTAAGGACGACAAAGGTGCTGCTTCTGAGAACTCTTGTATAGACATAGAATTTGATCATTTGACAGACAATAAGCCTAAGAGAAGTGAGAAACAAATATTTATTTGGGATGGTACCTGGAATGATGTTAGATACCGTACACAAGACATTCCAGTTACCCGTGAGCTGATTGGAAACATATGTACAATGCCAAACCAGGTCAACCCTAATGTTGTAGCTGTTAATAATACTAATGTAGTTGTAAAATCAGAACCATCTAGTGCTGCAGTGGACATTTCGTCATTACTTCTCTCTACGGGGATGGAGCAGCCGTTTGACAATTTTGTGAACGATAAGTTGTGGCATTATCAGGATCCATCTGGGATGGTTCAAGGACCCTTTTCTATACTGCAGTTGCATAAGTGGAATGCAAGTGGACATTTTCCTCTGGACCTCAGAATATGGAGGACATATGAGACACAAGATAACTCTATATTGTTGGCTGATGCACTTGTTGGGAAGTGTGCCAAAAATGTATCTGTGCCATACAACAGCCCGATGTCTTTAGAGTCCTGTGTTACATTGGATAATAAAGATAACATTCAGGATGGTGGGAGGAATGAAACAAGGGCGGAAATTCATGCTGACAGCCGAATTATCAATTCCGGTGGAGCTGAGAAGGTTGATGATGCTGGTACCCCGTCTAACTGTAAAGATGAATCTGTTAGGAGCAATGGTTTGCAGTCTCATTCTTCTAGTTGGAATATGGCAGTCGACATGAATGAGGGGCAAAGTGGAAATCTTGAAAGGAGAGAGGAGTCGTCCAAATGTGAAATTTTGAATCCCAACCAGCCCGATTTGCTACCTTCAACCACCTTTTCGAAGAAACCAAATGAAAGCTCTCCTGATACAGTACAGGAAGGTCATGGAGTTGAGGGGAACACTGAAGATAATGTGAACCATTGCCAGAACAGGACTCCTGAAGGTCAGAGTAGTGGGAGTTACCAGAAAGACTGTGAGGAGAATTCAGGGCAGTCTTCTGGGCAGAACTGGGAATGCCCTCAAGTAATTAATCCAACGTGTAATACATCTATGTGGCAGGCAATCTTTGGTGAACCCGCCGAATTTGGCTCTTTAGTTGACGAATCAGTCTCTGATCTGTTGGCTGAAGTAGAGGCAATGGAGTCACTTGGTGGTGGTGGTTTGGAGTCTCCCACTTCAATCATGAAGTGTGATGATGAATTGACAGATGGTTCTAAAAATGATTGTCTCAGTTTTGCACTTGGCCTTGGCCTTGGCCCCATGCTTGATGCAGGGAAAGGTGATTCATTGAGCTCAACAGGTGACTTACACTTACCATCGCAGTTCACGACAGCAGAAGAACCATTTCGGCATGCTGGTGTGCACCAACATCATCAAAGAATACGCGGGGATCATTCTTCTAGCAGTTCTGTAGTTCAGTCTACTTTCTCGAGCATTAGCTGGAATCCAACCAGTCAATACTCCTGGGATCCTAAATGTTGA 2241 0.4534 MDQPLQQQQTTTAEVVRDSDSQLSGVPSDANVAERIAASACAPNSEVAVPDAAGLKRKRGRPARGVPRATPAPAPVRQKKEEEDVCFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFRSKAKWNCGWHICSVCQKGSHYMCYTCTYSLCKGCTRDADFVSVRGNKGFCGMCMKTIMLVENPGQENKCEVDFDDKTSWEYLFKIYWVCLKEKLSLTVDELRQAKKPWKSATPLSCKVETPHQLYHLKDDKGAASENSCIDIEFDHLTDNKPKRSEKQIFIWDGTWNDVRYRTQDIPVTRELIGNICTMPNQVNPNVVAVNNTNVVVKSEPSSAAVDISSLLLSTGMEQPFDNFVNDKLWHYQDPSGMVQGPFSILQLHKWNASGHFPLDLRIWRTYETQDNSILLADALVGKCAKNVSVPYNSPMSLESCVTLDNKDNIQDGGRNETRAEIHADSRIINSGGAEKVDDAGTPSNCKDESVRSNGLQSHSSSWNMAVDMNEGQSGNLERREESSKCEILNPNQPDLLPSTTFSKKPNESSPDTVQEGHGVEGNTEDNVNHCQNRTPEGQSSGSYQKDCEENSGQSSGQNWECPQVINPTCNTSMWQAIFGEPAEFGSLVDESVSDLLAEVEAMESLGGGGLESPTSIMKCDDELTDGSKNDCLSFALGLGLGPMLDAGKGDSLSSTGDLHLPSQFTTAEEPFRHAGVHQHHQRIRGDHSSSSSVVQSTFSSISWNPTSQYSWDPKC 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00886 746 SUPERFAMILY FYVE/PHD zinc finger 57 130 IPR011011 -
Adu05g00886 746 MobiDBLite consensus disorder prediction 476 501 - -
Adu05g00886 746 Pfam GYF domain 360 400 IPR003169 GO:0005515
Adu05g00886 746 PANTHER BNAC08G48800D PROTEIN 324 724 - -
Adu05g00886 746 PANTHER BNAC08G48800D PROTEIN 6 278 - -
Adu05g00886 746 MobiDBLite consensus disorder prediction 1 28 - -
Adu05g00886 746 MobiDBLite consensus disorder prediction 43 76 - -
Adu05g00886 746 SMART gyf_5 358 413 IPR003169 GO:0005515
Adu05g00886 746 ProSiteProfiles GYF domain profile. 357 411 IPR003169 GO:0005515
Adu05g00886 746 CDD GYF 357 410 IPR003169 GO:0005515
Adu05g00886 746 MobiDBLite consensus disorder prediction 517 590 - -
Adu05g00886 746 ProSiteProfiles Zinc finger PHD-type profile. 83 149 IPR019787 -
Adu05g00886 746 SMART PHD_3 85 131 IPR001965 -
Adu05g00886 746 CDD PHD5_NSD 85 130 - -
Adu05g00886 746 MobiDBLite consensus disorder prediction 462 590 - -
Adu05g00886 746 ProSitePatterns Zinc finger PHD-type signature. 86 146 IPR019786 -
Adu05g00886 746 Gene3D - 359 413 IPR035445 -
Adu05g00886 746 PANTHER UNCHARACTERIZED 324 724 - -
Adu05g00886 746 PANTHER UNCHARACTERIZED 6 278 - -
Adu05g00886 746 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 176 IPR013083 -
Adu05g00886 746 SUPERFAMILY GYF domain 355 409 IPR035445 -
Adu05g00886 746 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00886 Adu-Chr5 11164085 11167980 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00886 - - aip:107642933 1459.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00886 05 11164085 11167980 Adu05g00886 05 11164085 11167980 ECH