Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00817 ATGGCAGCTGCTAGGTTAACCACTTGCGCCGCGGTGGCAGCCGCGGTGGCTTCCATGTCCTCGCTTTCCGATCGCGCCGCCCACGCCGATTCTTCTTTTCGCTTCCCGTTCTTCTCTTCTTCACCTTCCAATTCCCCTTCGCCGTCCGACCCTGCTTCCGATTCTAAGATGGAGCAGCCTCCCCCCGATGAACCTAACAAGTCCGGCTTCGACCCGGAATCGTTGGAAAGAGGAGCCAAAGCCCTCCGTGAAATCAATAGTTCTCCCTACTCTAAACAGGTGTTTGACTTAATGCGAAAGCAGGAACAAACTCGCCTTGCTGAGTTAGATGCTGAGAAAGTTTATTTTGAACTTATTCAATCCCAAGGAGATATTGAAAGGCAGCAGAAAATGGCTGAAGAACAGCGAAATCTAATGCAAGAGCAAGCTCAGAAACAGGCCCAGGTGCTGCGATATGAAGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAGCTCAAAGGCGACACAATGTTGAATTGGTTAAGATGCAAGAGGATTCTTCTGTAAGAAAGGAGCAGGCAAGACGTGCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAGAGAGCGTGCTGAGATAGAAAGAGAAACTATTAGAGTTAAAGCAATGGCAGAGGCTGAAGGTCGAGCGCATGAAGCAAAATTGACTGAGGATCATAAAAGGAGAATGCTTATGGAACGGATGCAGGGTGAAAGAGATAAATGGCTTGCTGCGATCAACACAACCTTTGGTCATATTGAAGGTGGTTTAAGGGCCTTATTGACTGATAGGGACAAATTGGTTATGACTGTTGGGGGAGCTACTGCATTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAAGTTACATGGGGCTATATAAATCGGATTTTGGGGCAGCCATCATTGATCCGGGAATCATCCATGGCAAAGTTTCCAGGCTCAAGAATCATATCTCAAGCCAAAAATAGAGTTTTCAATTATAGTACTATGGCCAGGGCAGAAAAGCCTGTTGAGAGTCAAAATGGTGGTCTTGGAAATGTAATCCTCCATCCATCATTGCAGAAAAGAATAGAGCATCTTGCACGGGCAACATCAAATACCAAGGCTCATCAGGCACCATTCCGCAACATGCTTTTCTACGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGGAAATCGGGTTTGGATTATGCTATGATGACTGGAGGAGATGTTGCACCTTTGGGCCCACAGGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCAAGAAAAGGTTTATTGCTTTTCATTGACGAGGCCGATGCTTTCCTGTGCGAGCGTAACAGCACCCACATGAGTGAAGCTCAACGAAGTGCACTAAACGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATTGTACTTGTCCTTGCCACCAACAGACCCGGTGATCTTGATAGTGCAGTCACTGATCGCATCGACGAAGTGATTGAATTCCCCCTCCCTGGAGAGGAGGAACGTCTAAAATTATTGAAGCTCTATTTGAACAAATATATATGTACTGACAATAATGGCTCCAAGAAAGGCGTGTTGCTAAAGCAGACCCAGAAGATTACGGTAAAAGATTTATCCGAGGATGTGCTAAGAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGGCGCGAGATAGCCAAACTTGTGGCCGGTGTCCAAGCTGCTGTTTATGGGCGCCCAGACTGCACCTTGGATTCTCAGTTGTTCAAAGAAATCGTAGATTATAAAGTGGTGGAACAATTCATTAAAATATTTGTTACCTAG 1866 0.4577 MAAARLTTCAAVAAAVASMSSLSDRAAHADSSFRFPFFSSSPSNSPSPSDPASDSKMEQPPPDEPNKSGFDPESLERGAKALREINSSPYSKQVFDLMRKQEQTRLAELDAEKVYFELIQSQGDIERQQKMAEEQRNLMQEQAQKQAQVLRYEDELARKRMQTDHEAQRRHNVELVKMQEDSSVRKEQARRATEEQIQSQQRQTERERAEIERETIRVKAMAEAEGRAHEAKLTEDHKRRMLMERMQGERDKWLAAINTTFGHIEGGLRALLTDRDKLVMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIISQAKNRVFNYSTMARAEKPVESQNGGLGNVILHPSLQKRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYICTDNNGSKKGVLLKQTQKITVKDLSEDVLREAAKKTEGFSGREIAKLVAGVQAAVYGRPDCTLDSQLFKEIVDYKVVEQFIKIFVT 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00817 621 Pfam ATPase family associated with various cellular activities (AAA) 390 517 IPR003959 GO:0005524|GO:0016887
Adu05g00817 621 SMART AAA_5 386 519 IPR003593 -
Adu05g00817 621 CDD AAA 382 517 - -
Adu05g00817 621 MobiDBLite consensus disorder prediction 34 54 - -
Adu05g00817 621 Pfam ATPase family AAA domain-containing protein 3, N-terminal 58 317 IPR021911 -
Adu05g00817 621 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 614 - -
Adu05g00817 621 MobiDBLite consensus disorder prediction 162 210 - -
Adu05g00817 621 MobiDBLite consensus disorder prediction 34 77 - -
Adu05g00817 621 Gene3D - 333 535 IPR027417 -
Adu05g00817 621 MobiDBLite consensus disorder prediction 162 193 - -
Adu05g00817 621 Coils Coil 183 217 - -
Adu05g00817 621 ProSitePatterns AAA-protein family signature. 489 508 IPR003960 GO:0005524|GO:0016887
Adu05g00817 621 Coils Coil 125 155 - -
Adu05g00817 621 PANTHER PUTATIVE ATP-ASE 1 614 IPR039188 GO:0005739|GO:0007005
Adu05g00817 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 617 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00817 Adu-Chr5 9917035 9921246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00817 366 592 Miscellaneous Gene Families AT5G53170 30.085 4.44e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00817 K17681 - gmx:100777755 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00817 05 9917035 9921246 Adu05g00817 05 9917035 9921246 ECH