Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00801 ATGTGGCGGTGCGTCGCTCGTCGACTTCGTGTTCCTCCACCCTCCGACGGATCCACACCTAATCACTCTCTTAGATCTCACTTTTCTAGATTCTTCTCTAGCGGAGGGAACTCGTCGTACACGGTGGTGGATCATAAGTATGATGCTGTTGTGGTAGGTGCTGGTGGCGCTGGGTTGAGAGCTGCTATTGGACTTTCCGAGCATGGATTCAACACTGCTTGCATCACCAAGCTCTTCCCAACTCGTTCTCACACTGTTGCAGCTCAGGGCGGTATAAATGCTGCATTGGGAAATATGACTGAAGATGACTGGAGGTGGCACATGTATGACACTGTCAAGGGAAGTGATTGGCTAGGTATACACTCCTGTTCTCGGAAGTTTTTTGTATTCATTATATCCTACAAAAGTTCTGACCTGGAATTCCTTTGTTGCCATGATACAGGTGGTCAGGCCTACCGATGTGCATGTGCCGCTGATCGTACTGGACATGCTTTGTTGCACACTCTTTATGGCCAGGCTATGAGACATAATACACAGTTTTTTGTTGAGTATTTTGCATTGGACCTTATAATGAATAATGACGGTGATTGCCAAGGAGTAATTGCCTTGAATTTGGAGGACGGAACATTACATCGGTTTCAAGCTGCTTCAACAATTTTGGCAACAGGGGGTTATGGTAGAGCATATTTTTCCGCAACCTCTGCACATACATGTACTGGAGATGGTAATGCCATGGTTGCACGTGCTGGACTCCCTCTCGAGGATTTGGAGTTTGTGCAGTTTCACCCAACAGGTATATATGGAGCAGGTTGCCTTATCACAGAAGGTTCCCGGGGTGAAGGTGGAATTCTAAGAAATAGTGAAGGTGAGCGATTTATGGAACGATATGCTCCCACTGCAAAGGATCTTGCATCAAGAGATGTAGTTTCAAGATCAATGACTATGGAGATTCGGGAAGGTCGTGGTGTAGGACCCTTGAAAGATCACATCTATCTCCACTTGAATCACTTACCCCCAGATGTGCTCAAGGAGAGACTTCCTGGAATATCGGAAACAGCTGCTATTTTTGCTGGTGTGGATGTTACAAAGGAACCCATTCCTGTTTTGCCCACTGTGCATTATAACATGGGTGGTATACCTACAAACTATCATGGAGAGGTGGTTACCATTAAAGGTGACGACCCAGATGCAGTAGTTCCTGGATTGATGGCTGCTGGAGAAGCAGCTTGTGCGTCGGTGCATGGAGCCAATAGGCTTGGTGCCAATTCGCTTCTGGATATTGTAGTTTTTGGCAGAGCTTGTGCAAATAGGGTTGCAGAAATCCATAGGCCAGGCAAGATTCTTTATCTTGACGCTGGTCAGAAAACAATTGCCTGGCTGGACAAGTTGAGAAATTCAAATGGTTCATTGCCAACAGCGAAAATTAGGTTAAATATGCAACGGATAATGCAAAATAATGCTGCTGTATTCCGTACACAAGACACATTAGCAGAAGGTTGCCAATTAATTGATAAAGCGTGGGAGAGCTTCCATGATGTCAAGTTGGAGGACCGGAGTTTAATTTGGAACTCCGACCTGATTGAGACTATTGAGTTGGAAAACCTTTTGATTAATGCCTGCATCACAATGCACTCAGCTGAAGCCAGGAAAGAAAGCAGAGGAGCTCATGCCCGTGAGGATTTCACGAAAAGAGATGATGAGAACTGGATGAAACACACTTTGGGGTATTGGGAGAAGGAGAAGGTCCGGTTGGACTACAGGCCGGTGCACATGAATACACTAGATGATGAGGTTGAGTCATTCCCTCCCAAAGCTCCATACCAAAACGAGTGCTCTCCTATTCCGAACGGCCGAAACAGCTTTGGATTCACCGCCCCTGTGGGGATGGAGGGAAAGAAGCTTGAGAATTCCAAGAGGTCACTTAGAGGTTATCATGGTGAGGCGGCCGAAGATACGGCTCATGGGATAGAATGCGCCGCAACATCCGCGATTAAACTTGTATTCAAGTTTCCTGAACTAGCAGTCTAG 2028 0.463 MWRCVARRLRVPPPSDGSTPNHSLRSHFSRFFSSGGNSSYTVVDHKYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGIHSCSRKFFVFIISYKSSDLEFLCCHDTGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYFALDLIMNNDGDCQGVIALNLEDGTLHRFQAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIHRPGKILYLDAGQKTIAWLDKLRNSNGSLPTAKIRLNMQRIMQNNAAVFRTQDTLAEGCQLIDKAWESFHDVKLEDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWEKEKVRLDYRPVHMNTLDDEVESFPPKAPYQNECSPIPNGRNSFGFTAPVGMEGKKLENSKRSLRGYHGEAAEDTAHGIECAATSAIKLVFKFPELAV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00801 675 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 280 385 IPR027477 -
Adu05g00801 675 SUPERFAMILY FAD/NAD(P)-binding domain 40 449 IPR036188 -
Adu05g00801 675 Gene3D succinate dehydrogenase protein domain 559 606 - -
Adu05g00801 675 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 3 605 IPR030664 -
Adu05g00801 675 TIGRFAM sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 48 596 IPR014006 GO:0016627|GO:0022900|GO:0050660
Adu05g00801 675 Pfam Fumarate reductase flavoprotein C-term 477 604 IPR015939 GO:0016491
Adu05g00801 675 Gene3D - 48 434 IPR036188 -
Adu05g00801 675 Gene3D - 448 558 - -
Adu05g00801 675 Pfam FAD binding domain 48 424 IPR003953 -
Adu05g00801 675 ProSitePatterns Fumarate reductase / succinate dehydrogenase FAD-binding site. 82 91 IPR003952 GO:0016491
Adu05g00801 675 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 256 374 IPR027477 -
Adu05g00801 675 PANTHER SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL 3 605 - -
Adu05g00801 675 PIRSF SDHA_APRA_LASPO 37 598 - -
Adu05g00801 675 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 467 605 IPR037099 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00801 K00234 - gmx:100802169 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00801 05 9690254 9695875 Adu05g00801 05 9690254 9695875 ECH