Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00611 ATGAAAGGCAAAGCGGTTAAAGGACACTTGATCTGGAACACAAGGAAGTTCAGCAAGCCTTCCATACTCATATGCATTTTCTTCTTTCTCGCTGGATTATTCGGTTCTAGCATTTTCTTTCACTCTCAGGAAGATACGAATGAAGGCTTGAGACTGAAAAGGAGTGAGTCGAGGTTGCTTAGATCGACGACGGAGAAAACGGAGTACAATTTGTTGCGCGCGGGAGAGTCAGGTGACAATTCCATCACGTTGATTCCTTTCCAGGTTTTGAGTTGGATGCCTCGCGCTCTCTATTTTCCTAATTTTGCGAGTTCAGAACAATGTGACAGTATAATTGAAATGGCAAGGGAAAGACTCGAACCATCAACTGTGGCATTACGGAAGGGAGAAACGAAAGCGAGTGCAGAGGGAATTAGAACAAGCTCTGGTATGTTTATTAAAGCTAACGAGGATGAAACAGGGATTTTAGATGTTATTGAGGAGAAAATAGCCAGAGCAACTAAAATTCCCCGGAGTCATTTTGAGGACTTTAATGTACTCCGCTATGAGATTGGACAGAGATATGCTTCTCATTATGACGCTTTCAATTCTGTGGAATTCGGTCCACAAGAGAACCCGAGGACATCACTCCACGGAAGCTGCCCCGTAATAAAAGGGGAGAAGTGGGTGGCGACAAAGTGGATGAGGGAACAAGTATATGGATAA 705 0.4383 MKGKAVKGHLIWNTRKFSKPSILICIFFFLAGLFGSSIFFHSQEDTNEGLRLKRSESRLLRSTTEKTEYNLLRAGESGDNSITLIPFQVLSWMPRALYFPNFASSEQCDSIIEMARERLEPSTVALRKGETKASAEGIRTSSGMFIKANEDETGILDVIEEKIARATKIPRSHFEDFNVLRYEIGQRYASHYDAFNSVEFGPQENPRTSLHGSCPVIKGEKWVATKWMREQVYG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00611 234 Gene3D q2cbj1_9rhob like domain 87 204 - -
Adu05g00611 234 SMART p4hc 94 229 IPR006620 GO:0005506|GO:0016705|GO:0031418
Adu05g00611 234 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 13 205 IPR045054 -
Adu05g00611 234 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 207 231 IPR045054 -
Adu05g00611 234 Gene3D q2cbj1_9rhob like domain 205 231 - -
Adu05g00611 234 PANTHER TYPE 1 PROLY 4-HYDROXYLASE 13 205 - -
Adu05g00611 234 PANTHER TYPE 1 PROLY 4-HYDROXYLASE 207 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00611 Adu-Chr5 6799309 6804567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00611 K00472 - gmx:100811904 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00611 05 6799309 6804567 Adu05g00611 05 6799309 6804567 ECH
Adu05g00611 05 6799309 6804567 Adu09g02607 09 113539127 113542078 PCT