Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00516 ATGGTTCCTAAAGTTCATGCAGGGTTGGAAATGGCAGTTGGGGAGAATAATAACAATGAGAACAATGGAAGAAGCAGAAGCATTATTGATGGGAAGTGGATGAAGCGTGCAAATGTGTTTGGTGAGAGGATGAGAAAGTTTCCTAGTGTTGCATGGAAGACTACGTGGAGTGTGGGGCGTGAAGACCCTAGAAGGTTGATCCATGCATTCAAAGTTGGTCTCTCTCTCACTCTTGTTTCTTTGATGTATCTCTTGGAGCCCATGTACCATTGGATTGGCCAGAGTGCCATCTGGGCTGTCATGACTGTTGTCGTCGTCCTCGAGTTCACTGCAGGAGCAACTTTATGCAAAGGGCTGAATAGAGGATTAGGGACACTGTTAGCAGGGTCTTTGGCATTTATTGTTGGATATATTGCAAATGCATGTAGTAGGGTTGTTCAAGCTATTTTCATTGGGGCTGCAGTTTTTGTTATAGGAGCTGTAGCTAAGATTGCACATGACAGAATCTACACCATTGCTATTGGCTGTGGCATTTGCCTCCTCATGAGTTTGCTCATATTCCCAAATTGGTCAGGGGAAGATCTCCATAATTCAACAGTTTACAAGCTTGAAGGCCTAGCAAAATCAATAGAAGCTTGTGTGAATGAATACTTTTATGGAGAAATTGAAGCCTCTGGAGAGGACAAATCATCTGAGGATCCAATATACAAAGGCTATAAAGCTGTTTTGGATTCAAAATCCTCTGATGAAATGTTGGCATTACATGCAAGTTGGGAGCCAAGGCATTCATGTCACAGATTTCCATGGCAGCAGTATGTTAAAGTTGGAGCTGTTCTTCGCCAATTCGGATACACTGTGGTTGCTTTACATGGCTGTTTGAGAACAGAAATTCAGACTCCAAGATCTGTTAGAGCCATGTTCAAGGACCCCTGCATAAGGCTTTCAGCAGAGGTATCAAAAGCACTGATAGAACTTGCTAACAGCATAAGGCACCGGCGCCATATCTCTCCGGAAATACTCTCTGATCATCTCCATGAAGCCCTGCAGGATCTTAACACTGCCATAAAATCCCAGCCACGCCTTTTCTTGGGCTCCAAGAACAAGCACAACCATGGTAACAGCATGTTCAAGATAGCTGCAGCACAAGTTGGCCAAGAAAGACAGGGAAAGACATCTGGATTCTCCTTATCGAGCGTTAAGACGGACTCTTCTGCATTGTTGGAATGGAAAACAAAGAGGGGTTGCAATGAACATTCAAAGGAAACAGAAGGAAAGTCCTTGAGACCACAGTTGAGTAAGATTGCTATCACTAGCCTTGAGTTCTCTGAGGCTCTCCCTTTTGCTGCTTTTGCATCTTTGCTTGTGGAAATGGTGGCCAAGCTAGACCTTGTCATTGAGGAAATTGAGGAACTGGGCAGGTTAGCATGCTTCAAAGACTTCAGGCCTGATGATAACATTGTTGTGACTTGTGAGGAACCCCGAGTCGATGTGATGCAGAACCATTTGCCTTCACATGATTTGCATTTTCTCTGCTTGGTGAGGATGCAGTGA 1551 0.4423 MVPKVHAGLEMAVGENNNNENNGRSRSIIDGKWMKRANVFGERMRKFPSVAWKTTWSVGREDPRRLIHAFKVGLSLTLVSLMYLLEPMYHWIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGSLAFIVGYIANACSRVVQAIFIGAAVFVIGAVAKIAHDRIYTIAIGCGICLLMSLLIFPNWSGEDLHNSTVYKLEGLAKSIEACVNEYFYGEIEASGEDKSSEDPIYKGYKAVLDSKSSDEMLALHASWEPRHSCHRFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLSAEVSKALIELANSIRHRRHISPEILSDHLHEALQDLNTAIKSQPRLFLGSKNKHNHGNSMFKIAAAQVGQERQGKTSGFSLSSVKTDSSALLEWKTKRGCNEHSKETEGKSLRPQLSKIAITSLEFSEALPFAAFASLLVEMVAKLDLVIEEIEELGRLACFKDFRPDDNIVVTCEEPRVDVMQNHLPSHDLHFLCLVRMQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00516 516 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 162 - -
Adu05g00516 516 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 162 - -
Adu05g00516 516 Pfam Aluminium activated malate transporter 161 472 IPR020966 GO:0015743
Adu05g00516 516 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 161 504 - -
Adu05g00516 516 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 161 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00516 Adu-Chr5 5413177 5416460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00516 1 493 Miscellaneous Gene Families AT4G17970 56.392 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00516 - - gmx:100788625 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00516 05 5413177 5416460 Adu05g00516 05 5413177 5416460 ECH