Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00494 ATGACCGTCTCCTCTGAAAGCAAGAATTCTCTCACTCAACTAGCTCCACTTGAGGCAGTGCTCTTTGATATAGATGGAACTCTCTGTGACTCTGATCCACTCCACTACTACGCTTTCCGTGAAATGCTCAAAGAGATTGGTTTCAATGGAGGTGTTCCTATAACAGAGGAATTTTTCATTGAGACTGTTGCCGGCAAGCACAATGATGATATTGCCTTGGCTCTCTTTCCTGGTGATCTTGAACGAGGCTTAAAGTTTGTAGATGACAAGGAAGACATGTTCCGGAAATTGGCAAAAGAGCAAGTAAAGCCATTGAATGGCCTTGATAAAGTGAGGGAATGGATTGAAAGTCGTGGGCTGAAGCGAGCGGCAGTGACCAATGCTCCAAGAGCTAATGCAGAACTCATGATCTCATTGCTTGGTCTCTCAGACTTTTTTCATGCTGTCATTATTGGTGGAGAATGTGAACATGCCAAGCCTCATCCAGACCCCTACTTGAAAGGTCTTGAAGCTCTGAAAGCATCAAAGGATCACTCATTTGTATTTGAGGATTCTGTTTCTGGGATCAAAGCTGGAGTGGCAGCTGGGATGCCTGTTGTAGGTTTAGCTACTCGAAACCCGGAGCATCTACTGATGGAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGCAGACCCAAAATTGTGGGAAGCTTTGGAAGAACTTGACAAGGCTGTTTCCCCTTCCAGCTTCGGTGCTCCACCTCTGCCACGTCACATGGCCGGTGCCGCTTGCGCTCTCCATCTCCGGCTCCTCTTACCGCCTTGCGTTCAAACTGATTCTCCGAGTAACCTTTACTATTCATCATCCTCTTCCATTCCATTTGTTTTATCGATCAACAGAACCAACGGCCCAAGACCCAATTCTCGTTCAGGTCACCTATGCTGCAGCAAGGGTTCTCTTGCTAAACTAGCTCCCCTTGAGGCAGTGCTCTTTGATGTAGATGGAACTCTCTGTGACTCTGATCTGCTCCATTACTATGCTTTCCGCGAAATGCTCCAAGAGATTGGTTACAATGGAGGTACTCCTATAACAGAGGAATTCTATAGTGAGAATATTTCTGGCACACACGACGAGGATGCTGCCTTGTTTCTCTTTCCTGACGACCGGGAACGGGGTTTGAAGTTTGTAGAAGATAAGGAAGCCATGTTCCGGAAATTGGCAAAAGATCAACTAAAGCCTTTAAATGGCCTCGATAAAGTGATTAAATGGGTTGAAGATCGTAGCCTGAAGCGCGCTGCAGTGACCAATGCTCCAAGACCGAATGCAGAGCTCATGATCTCAAAGCTTGGCCTCTCAGATTTCTTTGATGCTGTCATTATCGGTAGCGAATGTGAACATGGCAAGCCTCATCCAGATCCCTACCTTAAAGGTCTTGAAGCTCTCAAAGCATCAAAGGATCACACATTTATATTTGAGGATTATGATGATCCAAAACTGTGGGCAGCTTTGGATGAACTTGACAAGGCTGGTGCTCGTTGA 1521 0.4596 MTVSSESKNSLTQLAPLEAVLFDIDGTLCDSDPLHYYAFREMLKEIGFNGGVPITEEFFIETVAGKHNDDIALALFPGDLERGLKFVDDKEDMFRKLAKEQVKPLNGLDKVREWIESRGLKRAAVTNAPRANAELMISLLGLSDFFHAVIIGGECEHAKPHPDPYLKGLEALKASKDHSFVFEDSVSGIKAGVAAGMPVVGLATRNPEHLLMEAKPAFLIKDYADPKLWEALEELDKAVSPSSFGAPPLPRHMAGAACALHLRLLLPPCVQTDSPSNLYYSSSSSIPFVLSINRTNGPRPNSRSGHLCCSKGSLAKLAPLEAVLFDVDGTLCDSDLLHYYAFREMLQEIGYNGGTPITEEFYSENISGTHDEDAALFLFPDDRERGLKFVEDKEAMFRKLAKDQLKPLNGLDKVIKWVEDRSLKRAAVTNAPRPNAELMISKLGLSDFFDAVIIGSECEHGKPHPDPYLKGLEALKASKDHTFIFEDYDDPKLWAALDELDKAGAR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00494 506 Gene3D Putative phosphatase; domain 2 333 407 IPR023198 -
Adu05g00494 506 Gene3D - 322 487 IPR023214 -
Adu05g00494 506 Gene3D Putative phosphatase; domain 2 32 100 IPR023198 -
Adu05g00494 506 SFLD Haloacid Dehalogenase 320 487 - -
Adu05g00494 506 CDD HAD_BPGM-like 322 487 - -
Adu05g00494 506 SUPERFAMILY HAD-like 14 234 IPR036412 -
Adu05g00494 506 Pfam Haloacid dehalogenase-like hydrolase 20 201 IPR041492 -
Adu05g00494 506 Pfam Haloacid dehalogenase-like hydrolase 323 487 IPR041492 -
Adu05g00494 506 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 17 225 - -
Adu05g00494 506 SUPERFAMILY HAD-like 316 487 IPR036412 -
Adu05g00494 506 CDD HAD_BPGM-like 19 204 - -
Adu05g00494 506 Gene3D - 18 225 IPR023214 -
Adu05g00494 506 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 310 487 - -
Adu05g00494 506 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 4 238 - -
Adu05g00494 506 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 310 487 - -
Adu05g00494 506 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 4 238 - -
Adu05g00494 506 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 201 IPR006439 -
Adu05g00494 506 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 17 225 - -
Adu05g00494 506 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 320 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00494 Adu-Chr5 5207123 5212518 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00494 - - gmx:100793483 434.876