Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00482 ATGGCGGAATCGGTGGAGCTTCCGAGCCGGTTGGCAATCCTTCCTTTCAGGAACAAGGTGCTGCTTCCCGGCGCCATCATCAGAATCCGCTGCACTTCTCCAACCAGTGTGAAGCTGGTGGAACAAGAGCTTTGGCAGCGAGAAGAGAAGGGGATGATTGGCATCTTGCCAGTTCGTGATGCTGCTGAAGTTAAGCCAGTGGGTCCCACTATGTCTCAAGGTGATACATTGCTTAGTCTTGATTCTCTAGATCAAAGCTCAAAACTTCAAGGTGGTTCATCTGATTCTCATAAACTTGATGCAAAAAATCAGAATGATGTTGTTCATTGGCATAACAGGGGGGTAGCTGCTCGAGCATTACACTTGTCAAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACGTATATAGTTGTTCTTGAAGGTTTGTGCAGATTCAGCGTCCAAGAACTAAGCACAAGAGGGACATACCATACTGCAAGGATCTCCTCCCTTGAGATGACTAAGACTGAGATGGAACAGGTGGAGCAAGACCCTGATTTCATAATGCTGTCTCGCCAATTTAAAGCGACTGCCATGGAGCTTATTTCTCTTCTAGAGCAGAAACAAAAAACTGGTGGAAGGACAAAGGTTCTTTTGGAGACTGTCCCAGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGCTTTGAAGAACAACTGTCTATGTTGGATTCAGTTGATCCTAAAGTGAGGCTTTCAAAAGCAACTGAATTAGTTGATAGGCACTTACAATCTATACGTGTAGCAGAGAAAATTTCACAAAAGGTTGAAGGACAACTGTCAAAATCTCAAAAGGAATTTCTTCTGCGTCAACAGATGAGGGCTATAAAAGAGGAACTTGGTGATGATGATGATGATGAGGATGACCTTGAAGCTCTGGAAAGAATATAA 939 0.4409 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGMIGILPVRDAAEVKPVGPTMSQGDTLLSLDSLDQSSKLQGGSSDSHKLDAKNQNDVVHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMTKTEMEQVEQDPDFIMLSRQFKATAMELISLLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVDRHLQSIRVAEKISQKVEGQLSKSQKEFLLRQQMRAIKEELGDDDDDEDDLEALERI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00482 312 SMART lon_5 10 257 IPR003111 -
Adu05g00482 312 Gene3D - 166 300 - -
Adu05g00482 312 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 257 IPR003111 -
Adu05g00482 312 ProSiteProfiles Lon N-terminal domain profile. 11 257 IPR003111 -
Adu05g00482 312 Gene3D - 1 165 IPR046336 -
Adu05g00482 312 SUPERFAMILY PUA domain-like 10 256 IPR015947 -
Adu05g00482 312 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 311 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Adu05g00482 312 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00482 Adu-Chr5 5102440 5105759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00482 K01338 - gmx:100796650 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00482 05 5102440 5105759 Adu05g00482 05 5102440 5105759 ECH
Adu05g00482 05 5102440 5105759 Adu01g01284 01 29810912 29818457 PCT