Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00456 ATGGTCAACATGAAATGTGATGAAGGAACAGTCAGAATTATTGAGCTGGAGAAGCAATCATTTTGTGATCTTAAAGTTGTGAATAACACAGAGAACTATGTTGCTTTCAAGGTCAAGACTACTTCGCCAAAGAAGTACTTTGTACGGCCTAACACTGGTGTTATACAGCCCTGGGACTCGTGTATCATCAGAGTCACTCTTCAAGCCCAACGTGAATACCCTCCAGACATGCAATGCAAGGACAAGTTTCTACTACAGAGCACAGTAGTGAATCCAAATACTGATGTTGATGATCTTCCTGCAGATACTTTTAATAAGGAAAGTGGAAATACAATAGAAGAGTTGAAACTAAGAGTTGCGTATATTGCTTCTAACTTAACCCAAGGAAGCTCTGAAGATGATGCATTGAAGAACTCCGCACAAAAACTTGATAGTTCTTATAATCAGGCTTTACAGCAGCTGAAGGAAGAAAGAGATGCCGCCCTGAGACAAACACGACAGCTGCAACAGGAACTGGACATGCTGAAAAGGCGAAAAAGCCAAAGAGGAGATCCTGGCTTTTCCCTTATCTTTGCCTTTTTTGTAGGTCTCATTGGACTTGTGCTTGGCTTTCTTTTAAAACTTCTATTCTCTTCACCACCACCATCACTATCACCATCTACGGAATGA 669 0.4111 MVNMKCDEGTVRIIELEKQSFCDLKVVNNTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTVVNPNTDVDDLPADTFNKESGNTIEELKLRVAYIASNLTQGSSEDDALKNSAQKLDSSYNQALQQLKEERDAALRQTRQLQQELDMLKRRKSQRGDPGFSLIFAFFVGLIGLVLGFLLKLLFSSPPPSLSPSTE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00456 222 Pfam MSP (Major sperm protein) domain 12 106 IPR000535 -
Adu05g00456 222 SUPERFAMILY PapD-like 15 129 IPR008962 -
Adu05g00456 222 PIRSF VAMP_assoc_prot 124 208 IPR016763 GO:0005789
Adu05g00456 222 PIRSF VAMP_assoc_prot 1 150 IPR016763 GO:0005789
Adu05g00456 222 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 13 213 IPR016763 GO:0005789
Adu05g00456 222 ProSiteProfiles Major sperm protein (MSP) domain profile. 1 122 IPR000535 -
Adu05g00456 222 Gene3D Immunoglobulins 11 125 IPR013783 -
Adu05g00456 222 Coils Coil 137 178 - -
Adu05g00456 222 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 13 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00456 Adu-Chr5 4763172 4767099 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00456 - - aprc:113869624 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01436 01 37335295 37344131 Adu05g00456 05 4763172 4767099 PCT