Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00352 ATGGCGTCGACAGCACGATCTTCCTCCACGCTCCTCAAGCGATTCCTGGCCACGCGCATCAACCAGTCCCGCTCCGTTACCTATATGCCCCGTCCCGGAGACGGCGCCCCGCGCGCCGTCACACTGATTCCCGGCGATGGGATCGGTCCTCTAGTCACCGGCGCCGTTGAGCAGGTGATGGAGGCGATTCACGCGCCGGTGTACTTCGAGAAGTTCGAGGTCCACGGCGACATGAAGGCGGTGCCGCCGGCGGTGATTGAGTCGATCCGGAAGAACAAGGTGTGCCTCAAGGGAGGACTCGCGACGCCGATGGGCGGCGGTGTGAGCTCACTGAACGTGCAGCTGAGGAAGGAGCTCGACCTCTACGCTTCACTCGTCAACTGTTTCAACCTCCCTGGTATTACCACGCGCCACAACAACGTCGACATCGTCGTAATCAGGGAGAACACCGAAGGCGAGTACTCCGGCCTCGAGCACGAGGTCGTCCCGGGCGTCGTTGAAAGCCTCAAGGTAATAACGAAGTTCTGTTCGGAGCGCATTGCTAAATATGCTTTCGAGTATGCTTACCTTAATAACAGAAAGAAAGTGACTGCTGTGCACAAAGCAAACATTATGAAGCTTGCAGATGGTTTATTCTTGGAATCTTGTCGGGAGGTTGCAACAAAGTATCCCGGAATCAAGTATAACGAAATTATTGTAGATAACTGCTGCATGCAGCTTGTATCAAAGCCTGAGCAGTTTGATGTCATGGTGACCCCCAATCTGTATGGAAATCTCGTTGCAAATACAGCAGCAGGTATTGCTGGAGGTACTGGTGTCATGCCAGGAGGAAATGTTGGGGCTGAGCATGCTGTGTTTGAGCAAGGTGCTTCAGCTGGGAATGTTGGCAGTGGGAAGGAAGTGGAAGAGAAGAAAGCCAACCCTGTGGCACTGCTTCTTTCGTCAGCCATGATGCTGAGACACCTCCAGTTTCCTGCATTTGCTGACAGACTGGAAACTGCGGTGAAACGTGTAATTCTAGAGGGTCAATGCCGGACACATGACCTTGGAGGGACAAGCACCACTCAAGAGGTTGTTGATGCTGTGTTAGATGCTTTAAACTGA 1104 0.5335 MASTARSSSTLLKRFLATRINQSRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMEAIHAPVYFEKFEVHGDMKAVPPAVIESIRKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGITTRHNNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSGKEVEEKKANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILEGQCRTHDLGGTSTTQEVVDAVLDALN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00352 367 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 22 364 - -
Adu05g00352 367 SMART Iso_dh_2 39 362 IPR024084 -
Adu05g00352 367 Gene3D Isopropylmalate Dehydrogenase 25 365 - -
Adu05g00352 367 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 22 364 - -
Adu05g00352 367 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 36 365 IPR004434 GO:0006099
Adu05g00352 367 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 39 366 - -
Adu05g00352 367 Pfam Isocitrate/isopropylmalate dehydrogenase 40 362 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00352 Adu-Chr5 3737175 3741107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00352 K00030 - gmx:100778831 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00352 05 3737175 3741107 Adu05g00352 05 3737175 3741107 ECH