Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00350 ATGGAAAATTGTGTAGAAGATTCTTCAATACCGGAGTCGCAATTGTCTGATGAGCACCATCATCATCATAAACATGGTAGCAACAGAGATCTTCAGATGGAAAATGGTATATTCGACGGCGATCAAGGTCCAGCTGATAGTTATGATCAGCTTCTAGAAATGGTTGCTGACCTCAGATTTCAGAATGAATTCTTGAAGTCCCAGTTTGATGGATTTCGCAATGTAAACCATGTACATAGTGACTCTAGTCTGCAGAAAGGAGTTGGTGGTCCAGAAGGTGGGGAATCTGACAATGTGAAAGAACTTCAGAAAAGGATACAAGCACTAGATAAAGAACTTCTGGTAGAAAAACAAACAAGACTTGCATCTGAAGAGGCTTTGAAGCACCTTCAAACGGTATACTCAGAGGCAGAAGCAAAGGCCAGGGAGCTGTCTGAAAAGCTCGCAGAAGCTCAATCAAAACTGGAGCAAGAAATAAAAGATCGTGAAGAGAAGTACTCTGAACTTGACTCAAAGTTTAACAGGCTTCATAAACGAGCAAAGCAGCGTATTCAAGATGTTCAAAAGGAAAAAGATGATCTTGAGGCTCGATTCAATGAGGTGACTGAAACTGCTGAGAAAGCAACATCCCAACGGTCAGCATTACAACAAGAGCTAGAACGCACGAGGAAGCAAGCAAATGATGCATTGAAAGGAATGGATGCTGATAGGCAACATCTAAGAGGTGAAAACAACAGACTTCGAGATACTATTGAGGATTTACGGCGTTCTTTGCAACCTAAAGAGAGTGCCATTGAGTCATTGCAACAATCTCTTGCAGAAAAAGAACAGGCTGCTGATGAAAAAAAACAAGCTGCACTAGTGGAGCTCTCAGCTAAACATCAAAAGAATATAGAAAGTTTGGAGGCTCAACTTAATGATGCATTGTCCGATAGAAGCAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAGAAAGAGTCTAAAATTGCAGAGATGGAGGCAGCCTCATCTGGGGAGGCAGCACGACTTAGAGCATCTCTGGAAAGTATGAAGGGGGAGCTTTCTCACCTAAAACAAGAGCATGAAAAAGCAAGAGCAAGCTGGGAGACTGCATCTCAGGCACTCAAAATGAAACTTGAAACTGCTGAAAGCAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCGGAGGTCTCTGCTCAGACCAGGATTCTCAGTATGAGAGATGCTGAACTTTTGGCTGCCAAGGAAGAGATATGCAGTCTTGAGAGGGAATTTTCTTCATACAAAGTTCGAGCACATGCACTTCTTCAAAAGAAGGATGCAGAACTGGCTGCAGCTAAAGACTCTGAACAACTCAAAGCTCTTGAGGAAGCCCTAAAGGAGGCTGAAAATGAAGTATTATCGGTAACAGAAGAAAAGGATAAAGTTATTCAAGATCTTCAGTCTGCTATGGCTAATCATGAGAGAGAGCTTGTAGAAAGAGAGACGGCCCTTGAAAATGCCAAGCAACTAATAAGGAGCTTAGAAACAAAGCTTGACTCAGCTAATGCTCAGCACCTTAAGGAGAAAGAAGAATGGGGACTAAGCCTTAAAAATGTAGAAGAAACGTGGCGAATCAAATGTGACTCAATGAAGGCTGAAAACGAAGCAACTGCTGCACAAGATATGCAAAAGGAGTTGCAAGAGCTCAAACTGCAATATAAAAAATTGAAGGATGAACATGCTTCATTTCATGATATTGCTGATAAAATGATTGAGGAGAAGGATAATGAAATATCTAGACTTTCAGATGATAATAGGAATCTTCGTCAATCTCTTCAATCAAGACCACAGGTTTTTGTTTTTATGTTATTTTTTTCCTTTCCTGCTTTTAGCTCGCATAAAGTGGATTCAATGAATTTAAGTCCCTCTGCTGCAGAACAGCAAATTCTGCTCCTAGCTAGACAACAAGCTCAAAGAGAAGAAGAACTAGCACGATCACAGCGCCATATCTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGAGAGAATCGTCTCCACAGCCAACAGGAAGCAATACTAAAGGCTGAGCTTCGTGACATGGATAGATCAAAGAAAAGGGAAGGCGTAGATATGACATATTTGAAAAATGTTATCTTAAAGCTTCTTGAGACAGGTGAAGTGGAGGTATTGCTACCAGTTATTGGGATGCTTCTCCAGTTTAGTCCACAAGAGATGCAGAAGTGTCAACAGGCATATCAAAACTCAGCAGATGCATCACCAAATCCTACGAATGATGCCTCAGGATCTGGCCTCTCTCTTTTCTCAAGATTCTCATTTACATAA 2361 0.4125 MENCVEDSSIPESQLSDEHHHHHKHGSNRDLQMENGIFDGDQGPADSYDQLLEMVADLRFQNEFLKSQFDGFRNVNHVHSDSSLQKGVGGPEGGESDNVKELQKRIQALDKELLVEKQTRLASEEALKHLQTVYSEAEAKARELSEKLAEAQSKLEQEIKDREEKYSELDSKFNRLHKRAKQRIQDVQKEKDDLEARFNEVTETAEKATSQRSALQQELERTRKQANDALKGMDADRQHLRGENNRLRDTIEDLRRSLQPKESAIESLQQSLAEKEQAADEKKQAALVELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESKIAEMEAASSGEAARLRASLESMKGELSHLKQEHEKARASWETASQALKMKLETAESNCIRAEVEVAKIRSQLESEVSAQTRILSMRDAELLAAKEEICSLEREFSSYKVRAHALLQKKDAELAAAKDSEQLKALEEALKEAENEVLSVTEEKDKVIQDLQSAMANHERELVERETALENAKQLIRSLETKLDSANAQHLKEKEEWGLSLKNVEETWRIKCDSMKAENEATAAQDMQKELQELKLQYKKLKDEHASFHDIADKMIEEKDNEISRLSDDNRNLRQSLQSRPQVFVFMLFFSFPAFSSHKVDSMNLSPSAAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAILKAELRDMDRSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPQEMQKCQQAYQNSADASPNPTNDASGSGLSLFSRFSFT 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00350 786 SMART 1grip 713 757 IPR000237 -
Adu05g00350 786 Coils Coil 596 616 - -
Adu05g00350 786 MobiDBLite consensus disorder prediction 202 221 - -
Adu05g00350 786 ProSiteProfiles GRIP domain profile. 710 757 IPR000237 -
Adu05g00350 786 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 52 757 - -
Adu05g00350 786 Coils Coil 127 172 - -
Adu05g00350 786 Pfam GRIP domain 714 753 IPR000237 -
Adu05g00350 786 Coils Coil 291 339 - -
Adu05g00350 786 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 52 757 - -
Adu05g00350 786 Coils Coil 261 285 - -
Adu05g00350 786 Coils Coil 99 119 - -
Adu05g00350 786 MobiDBLite consensus disorder prediction 227 248 - -
Adu05g00350 786 Gene3D - 219 375 - -
Adu05g00350 786 Coils Coil 344 371 - -
Adu05g00350 786 Coils Coil 177 257 - -
Adu05g00350 786 Coils Coil 376 403 - -
Adu05g00350 786 Coils Coil 449 536 - -
Adu05g00350 786 Coils Coil 668 702 - -
Adu05g00350 786 MobiDBLite consensus disorder prediction 12 30 - -
Adu05g00350 786 Coils Coil 554 591 - -
Adu05g00350 786 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00350 Adu-Chr5 3711327 3719213 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00350 - - aip:107642516 1308.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00350 05 3711327 3719213 Adu05g00350 05 3711327 3719213 ECH