Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00340 ATGATGGAGAAGGCGGATTCGGTGCAGAAGCTTTACACGCGGATGCGGCTTTGGGACTTTCCGGATCAGTACGTGATTGAACCAACGGATGGTTCTTCTGGTTCTTCTTTGGCCATTAGTAAAGTCGATGGTTCCATGAAGCTAATCGATGAAGTTCCACAAGGTAACTCCCTTCAAGTTCCTAAGATTTATACCATCTTCGGTGTGGTTGGCATGTTGAGGCTTCTGGCTGGATCATATTTGCTGAAGACAGAAATGGAATTTCTAGGGCTGCTAAATGTTGCTGAGAAAACCCATGGTCTGTTCTTCTCATACGAAACTAACTTAACTCTGAGTGCACAGCGTTTAAATGCCCTAGGTGATGAGTCTAAATTGCTTCCTCTTTGGAGACAGGCAGAACCTCGCTTTCTTTGGAACAATTATATGTTGGAAGTGCTCATTGATAATAAGTTAGACCCATACTTACTCCCAGTAGTCCAAGGCAGTTTTCATTACTTTCAAGCAGCCATTGGGAAAGAGACTATTGATGTCACTTTAATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGATTATGGAGAAGAGGAGCTGATGCTGATGGGTATGCTGCGAATTTTGTGGAAACAGAGCAAATTATGCAGCTCAATGGGTATACTGCATCATTTGTTCAGGTTCGTGGTTCAATTCCATTGCTATGGGAGCAAATTGTTGACCTAACTTATAAACCAAAGTTTGAGTTAATGAAACATGACGAAGCTCCTCGAGTTCTGGAAAGACATTTCTTAGATTTAAGAAAGAAATATGGGGCAGTGCTGGCTGTTGATCTTGTTAATAAGCATGGTGGAGAAGGTCGGCTGTGTGAAAAATTTGGCAGTACAGTGCAGCAAGTGGCTAGTGATGATGTAAGATATGTGCACTTTGATTTTCATCAAGTATGTGGGCACATTCATTTTGAACGTCTCTCAATCCTTTATGATCAAATTTCGGATTTTATTGACACAAATGGATATCTTCTACTGAATGAAAAGGGAGAGAAAATGAAGGAACAACGTGGGATTGTTAGGACCAATTGTATTGACTGTCTGGACCGTACAAATGTAACTCAGAGCATGATAGGCCGAAAAATGTTGGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGTGCCGAAGAAACCATTAGTTCACATAAAAATCTGGATGAAAAATTTAAGATCTTGTGGGCAAATCATGGAGATGATATAAGTACACAGTACACAGGAACTCCTGCTCTGAAAGGAGACTTTGTAAGATTTGGACATCGAACATTTCAAGGGATACTAAAAGATGGCTGGAATGCTCTTCTACGCTATTATTTGAATAATTTTAGTGATGGAACTAGGCAGGACGCAATTGATCTCCTGCAAGGACATTATATAGTTTCTGTCAGCAGAGATGCAACTCCCTCTTCCAAGAAACAAGGCCTTGAATCTATAGCTTCACTTCCTCTAGCTTTGGGTCTGGTTTTAACTGGATTCTTTTTTGCAATCATGTCATTGAATCAAGGTCGATATGATTATCGGCACTTCTTCTTATCACTAATGTGGGCTGGCATTAGCATCGGGATAGCAGCAGTTATTCGATTCTTAAATCAAGATCCTCCCCACCTTGTATATTTGGCTCTATCTGTGCCATGTTTGAGATGGAAGAATGTTGAGGTTGTTGGAACTCATCAAATTTGA 1719 0.4072 MMEKADSVQKLYTRMRLWDFPDQYVIEPTDGSSGSSLAISKVDGSMKLIDEVPQGNSLQVPKIYTIFGVVGMLRLLAGSYLLKTEMEFLGLLNVAEKTHGLFFSYETNLTLSAQRLNALGDESKLLPLWRQAEPRFLWNNYMLEVLIDNKLDPYLLPVVQGSFHYFQAAIGKETIDVTLIARRCTRRNGTRLWRRGADADGYAANFVETEQIMQLNGYTASFVQVRGSIPLLWEQIVDLTYKPKFELMKHDEAPRVLERHFLDLRKKYGAVLAVDLVNKHGGEGRLCEKFGSTVQQVASDDVRYVHFDFHQVCGHIHFERLSILYDQISDFIDTNGYLLLNEKGEKMKEQRGIVRTNCIDCLDRTNVTQSMIGRKMLEYQLRRLGVFGAEETISSHKNLDEKFKILWANHGDDISTQYTGTPALKGDFVRFGHRTFQGILKDGWNALLRYYLNNFSDGTRQDAIDLLQGHYIVSVSRDATPSSKKQGLESIASLPLALGLVLTGFFFAIMSLNQGRYDYRHFFLSLMWAGISIGIAAVIRFLNQDPPHLVYLALSVPCLRWKNVEVVGTHQI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00340 572 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 86 540 - -
Adu05g00340 572 Pfam SacI homology domain 84 313 IPR002013 GO:0016791
Adu05g00340 572 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 10 86 - -
Adu05g00340 572 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 86 540 IPR030069 GO:0052866
Adu05g00340 572 ProSiteProfiles Sac phosphatase domain profile. 92 420 IPR002013 GO:0016791
Adu05g00340 572 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 10 86 IPR030069 GO:0052866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00340 Adu-Chr5 3620859 3630081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00340 2 540 Acyl Lipid Metabolism Gene Families AT3G51460 68.276 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00340 K21797 - gmx:100796999 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00340 05 3620859 3630081 Adu05g00340 05 3620859 3630081 ECH
Adu05g00340 05 3620859 3630081 Adu01g00844 01 11343049 11351432 PCT