Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00334 ATGGCTAGGGTTTTCGTTTCGTTTCTGCAATCTGCATCTTGTTCATCGGTTCTCTACGGGGTGCCCTGCCTTCAAAGCCCTTCACAGCAATATGGCATCATAGTACGGGTTTTGTGCTTTGTGGCGTCCTGGGGAGGGGCATTTTGGATTTTCGACTTTGCACTGCCACTTCTCTCTCCACCCTCCACCCTCTTTGCCGCCACCCCTTGCCTCCTTCTCAACGTTGTTGTCGTCGCTATTGTCATTGTGTCTTTGCTCACCTTTCTTCCTCCTTCACTTGCGTCGACGCCTCCTTCCCTCCAAATCTATATTCGCCGTTGCCCTCTTCACTCGTCGTCCATTGTATTGCCCCCTGCCATCACTATCGTCATGCTGCCTCGCCTTCAGATTTTCCTTGGGCCGCCTGTCTTCTTTGTCGCTCGTGCCGACGCCTCCATTACCTCGCCTCCAAATATGCCTTCACCCGCCTCTCTTTCTCCTTGGCTCGCGCCGGCATCGACGCCTCTGTTGCGTCTCCCTACATATAGATTTGTCTTCGCCGCTTTCAGATCCGGCTATTCTCCCTCACATCCTTCTTTTTTTTCCTATATTTTTTGTGCCTATTATTCTCTCACTGGGAGTAGTTTCGGACTCCATAACAAGAGTTTTAAAGCCACCTCGTTTTACGCCACACGCGGCAAATTGCTTCGACGCGCCGTCGTTCGCGATGGCCGTATCCGAAGCCTCAGCCTACCCTCCCATCGAGCCAACAAACTTCGATCTCATCATCGTTGGCACTGGCCTTCCGGAATCCATTCTCGCCGCCGCCGCTCCCTAATTGATCTCACTTCTCATCTCAACTCCCATTCCGTCCCCGCACCACCACTACCACCATCTGCCGCCGGATCCGGTGATTCCGATTACGCCGTCGTGGACCTCGTCCACGATCCACTCTACTCCGATATTGAGGTCGAATGGCATGGTTCCGAGGACGAAACCTCGAAGATTCGAGAAGATTCCAGAAAATTCAACATCGATTTGGGAGGACCTAGGGCGCTGTTCTGCGCCGATAGTTGCATCGATCTGTTGCTGAAATCCGGAGCGGCACAGTATCTCGAATTCAAGGGCGTGGATGCGAGCCTCGTGTACGAGCCTAATGGCAGCGGTTTGGCGAACGTGCCGGATTCTCGCGGAGCGATTTTCAGGGACAAGAATCTTTCGCTGAAGGAGAAGAACCAGCTGATGAGGTTCTTCAAGCTCGTGCAGCAGCACCTTGCTGGTGGTGGCGATCAAAGTGAAAGTGGCGGCGACATTCAGAAGATTTCGCAGGAAGATCTGGAGAGTCCATTCGTTAGTTTCCTGGATAAGATGCGGTTGCCGCCAAAGATAAAATCAATTCTTTTGTATGCTATCGCCATGTTAGATTATGACCAAGACAATAATGAGGTTTGCAAAGATTTGCTCAAGACAAAGGATGGTATTGATCGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCTAATGCACCAGGGGCTTTGCTTTATCCTATTTACGGTGAAGGAGAACTACCACAAGCTTTCTGTCGCCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCAGGATGCCAGTTACTTCTCTGCTTATTGATAAGGTTACTGGGTGTTATAAAGGTGTCAGACTAGTTTCAGGTCAAGATTTATATAGCCATCAGCTAATCATGGATCCGTCATTTGTGATTCTATCACCACTGTCCCCATCTCTAGGCGATTTTCCCAGAGAGAAGATCCAATTATTGAGTCAGAGAGATTTGAAAGGAATGGTGGCCAGGGGGATATGCATCACAAGGAGTTCCATAAAGCCTGATTTATTAAATTGCTCAGTGGTGTATCCCCCTAGATCTTTGTATCCTGAACAAGTGACGTCGGTCAGAGCTCTTCAAATAGGATCAAACCTTGCTGTTTGTCCCGCGGGCACCTTTATTTTATACTTCTCCACTGTGTGCAATGATGCTGATGAAGGAAAGAAGTTATTAAAAGCAGCCATGAATGCTCTTCTTACACCGCCTGTGTCTGTAACCTCTGAAAGTAATCCAATTGTTCAAAGTGATAATGAAGATGTAAAACCCATTGTGCTCTGGAATGCATTTTATATCCAGAAAGTATTCACGGGTAAATTTGACTCTATGACCTCCGCTCCAACACCAGATGGAAATCTAAACTACGCTGACATTTTAGATGCGACTGAGAAGCTATTCGGTCAAATGTACCCAGATCAAGCATTCTTTCCAAAGACAGAATCACCTGAAGATACTATGGATGAGAATGGAGTGATTATGGAAAGCTAA 2328 0.4802 MARVFVSFLQSASCSSVLYGVPCLQSPSQQYGIIVRVLCFVASWGGAFWIFDFALPLLSPPSTLFAATPCLLLNVVVVAIVIVSLLTFLPPSLASTPPSLQIYIRRCPLHSSSIVLPPAITIVMLPRLQIFLGPPVFFVARADASITSPPNMPSPASLSPWLAPASTPLLRLPTYRFVFAAFRSGYSPSHPSFFSYIFCAYYSLTGSSFGLHNKSFKATSFYATRGKLLRRAVVRDGRIRSLSLPSHRANKLRSHHRWHWPSGIHSRRRRSLIDLTSHLNSHSVPAPPLPPSAAGSGDSDYAVVDLVHDPLYSDIEVEWHGSEDETSKIREDSRKFNIDLGGPRALFCADSCIDLLLKSGAAQYLEFKGVDASLVYEPNGSGLANVPDSRGAIFRDKNLSLKEKNQLMRFFKLVQQHLAGGGDQSESGGDIQKISQEDLESPFVSFLDKMRLPPKIKSILLYAIAMLDYDQDNNEVCKDLLKTKDGIDRLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVTSLLIDKVTGCYKGVRLVSGQDLYSHQLIMDPSFVILSPLSPSLGDFPREKIQLLSQRDLKGMVARGICITRSSIKPDLLNCSVVYPPRSLYPEQVTSVRALQIGSNLAVCPAGTFILYFSTVCNDADEGKKLLKAAMNALLTPPVSVTSESNPIVQSDNEDVKPIVLWNAFYIQKVFTGKFDSMTSAPTPDGNLNYADILDATEKLFGQMYPDQAFFPKTESPEDTMDENGVIMES 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00334 775 SUPERFAMILY FAD-linked reductases, C-terminal domain 599 713 - -
Adu05g00334 775 PANTHER RAB GDP-DISSOCIATION INHIBITOR 272 764 IPR018203 GO:0005092|GO:0007264
Adu05g00334 775 PRINTS Rab GDI/REP protein family signature 403 418 IPR018203 GO:0005092|GO:0007264
Adu05g00334 775 PRINTS Rab GDI/REP protein family signature 352 368 IPR018203 GO:0005092|GO:0007264
Adu05g00334 775 PRINTS Rab GDI/REP protein family signature 513 534 IPR018203 GO:0005092|GO:0007264
Adu05g00334 775 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 272 764 - -
Adu05g00334 775 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 312 715 - -
Adu05g00334 775 Gene3D - 507 755 IPR036188 -
Adu05g00334 775 SUPERFAMILY FAD/NAD(P)-binding domain 309 583 IPR036188 -
Adu05g00334 775 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 386 506 - -
Adu05g00334 775 Pfam GDP dissociation inhibitor 323 677 IPR018203 GO:0005092|GO:0007264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00334 Adu-Chr5 3574622 3585351 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00334 K23460 - gmx:100795946 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00334 05 3574622 3585351 Adu05g00334 05 3574622 3585351 ECH