Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00270 ATGAAAACATGCCACGTCATCCCTAATTTGAGTCACTTGTACGAAGCATTGAAAAGTTCCGACCGTGCCGGAGCATCCGCCACGGCCAAGAAGGCGGCGTCCGGTGGAGCTACCACCGCGACTAAGGCGGCGAAGAAGGCGCCGAGCAGGCCGCGCAACAACGTGGGGATACAGAAGGTAGTGCCGGTGTCTTCCGAGCTCGGAAGCTTCCTCGGTGCTTCGGAGGTGTCCCGAACTCACGCTGTGAAGAGAGTGTGGGAGTACATCAAGCTGCAGAATCTTCAGAATCCTAGTAATAAGAAGGAGATCTTTTGTGATGACAAGTTGAAGACTATTTTTGATGGGAAAGACAAGGTCGGGTTCACAGAGATTGCAAGATTGCTAGCTACCCATTTTGTAAAATCAAGCTAG 411 0.5158 MKTCHVIPNLSHLYEALKSSDRAGASATAKKAASGGATTATKAAKKAPSRPRNNVGIQKVVPVSSELGSFLGASEVSRTHAVKRVWEYIKLQNLQNPSNKKEIFCDDKLKTIFDGKDKVGFTEIARLLATHFVKSS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00270 136 MobiDBLite consensus disorder prediction 28 54 - -
Adu05g00270 136 Pfam SWIB/MDM2 domain 61 132 IPR003121 -
Adu05g00270 136 SMART swib_2 57 136 IPR019835 -
Adu05g00270 136 SUPERFAMILY SWIB/MDM2 domain 52 134 IPR036885 -
Adu05g00270 136 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 13 136 - -
Adu05g00270 136 ProSiteProfiles SWIB/MDM2 domain profile. 56 134 IPR003121 -
Adu05g00270 136 CDD SWIB-MDM2_like 61 132 - -
Adu05g00270 136 PANTHER SWIB/MDM2 DOMAIN-CONTAINING PROTEIN-RELATED 13 136 - -
Adu05g00270 136 Gene3D SWIB/MDM2 domain 52 136 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00270 Adu-Chr5 2880243 2881307 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Adu05g00270 SWIB 4.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00270 - - adu:107487278 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00270 05 2880243 2881307 Adu05g00270 05 2880243 2881307 ECH