Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00250 ATGGGTTTGCCGAGGTTTGGGCGTCCCAAGAATGGTGTTGAACTGAGTCCAAACCTGTATGTGGCAAATTGTGGACCTGCTGTGGGGATCTCCCATGATGACATTGCATCTGTTTTCTGCAAATTTGGTGAGCTCAAAGGGGTTTATGCAGCTGATGAGAGTGGCACACGTGTCATTGTGTCTTTCTCTGAAGAGGGTTCTGCACAATCTGCATTCAAGGCATTAGATGGAACCCCATGTCCTGAACTCGGAGGAAGGTCCTTGCATATTCGTTATTCAGTGATTCAGCCAACTCCAAAGGATGAAGTTAGTGACATGGTTCCAGTATCTATTAATGCATCGGAATTGAGTATTCCAGGACTTTACCTAGTGCACAACTTCATTAGCGCTAAAGAAGAAGAGGAATTACTCCAAGCTGTTGACAGTCGGCCTTGGAACAGTCTTGCCAAAAGAAGGGTTCAACACTATGGTTATGAATTTCGTTACGATATTAGGAATGTTAATACAAGGCATTGCTTAGGTGAGCTTCCATCTTTTGTTTCTCCAATACTTGAAAGAATCTCATCATGTCCAACTTTCAAGAGTGCTGAACATATTGTTTTGGACCAACTTACTGTAAATGAGTATCCTCCTGGGGTGGGCTTGTCCCCCCATATAGATACCCATTCAGCATTCGAAGATTTAATTTTCAGCCTTTCATTATCAGGGCCTTGTATAATGGAGTTCAGAAAATATGAAAATGGTGATTGGCATACTAAAGTTGCCTCAAGTGCTGTTTCAGAAGGAGGAAGTCCGGAAGACGATTCAAATTTTTTAAGGAAGGCTATCTATCTACCCCCTCGATCTTTGCTACTCTTGTCTGGAGAAGCACGTTATGCATGGAACCATTATATTCCACACCACAAGATTGACAAAGTGAACGGCAGAGTCATCAGAAGGGCATCAAGAAGGGTCTCTTTCACATTTCGAAAGGTTAGAACAGGTGCATGCGAATGTGAATTCCCTCAGTATTGTGACTCCCAACGATAA 1029 0.4286 MGLPRFGRPKNGVELSPNLYVANCGPAVGISHDDIASVFCKFGELKGVYAADESGTRVIVSFSEEGSAQSAFKALDGTPCPELGGRSLHIRYSVIQPTPKDEVSDMVPVSINASELSIPGLYLVHNFISAKEEEELLQAVDSRPWNSLAKRRVQHYGYEFRYDIRNVNTRHCLGELPSFVSPILERISSCPTFKSAEHIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRKYENGDWHTKVASSAVSEGGSPEDDSNFLRKAIYLPPRSLLLLSGEARYAWNHYIPHHKIDKVNGRVIRRASRRVSFTFRKVRTGACECEFPQYCDSQR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00250 342 SUPERFAMILY Clavaminate synthase-like 118 326 - -
Adu05g00250 342 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 15 339 - -
Adu05g00250 342 SUPERFAMILY RNA-binding domain, RBD 15 99 IPR035979 GO:0003676
Adu05g00250 342 Gene3D - 7 107 IPR012677 -
Adu05g00250 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 326 IPR005123 -
Adu05g00250 342 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Adu05g00250 342 PANTHER UNCHARACTERIZED 15 339 - -
Adu05g00250 342 Pfam 2OG-Fe(II) oxygenase superfamily 121 323 IPR027450 -
Adu05g00250 342 SMART rrm1_1 18 91 IPR000504 GO:0003723
Adu05g00250 342 Gene3D - 111 332 IPR037151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00250 K10770 - gmx:100777529 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00250 05 2589509 2591692 Adu05g00250 05 2589509 2591692 ECH