Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00208 ATGGGTAAAGGCAACCCACAGAGAGGAAGCACCGGCGACGAGCTTCATACGGCGGCAAGGTCCGGTGATCTCGTCGCTGTTCAGATGATTTTGACTTCAAATCCTTTGGCTGTTAATTCCAGAGACAAGCATTCCAGAACACCACTTCATTTAGCAGCATTTGCTGGACATGCAGAGATAGTAAGTTATCTGTGCAAGAATAAGGCTGATGTTGGGGCTTCTGCTATGGATGACATGGCCGCAATACACTTTGCTGCTCAGAAGGGGCATTTGGAAGTTGTTAAGGCTCTAGTTGCAGCTGGTGCATCCATCAAGGCTTGTACTCGCAAAGGCATGAATTCATTACACTACGCTGCTCAAGGTTCCCATCTGGAGCTTGTCAGGTACTTGGCCAAGAAAGGGGCGAGTCTTACTGCCAAGACAAGGGCAGGAAAGACCCCTTTGGATCTTGCTAACAATGAAGAAGTCCGCTCGTTTCTGGAGGAATTCGAAAGATCAGCCAAGAACAGAGCATCTAGCAACAAAGATAAAGCTGAACAGTCTGATCCAAAAGCATCCACGTTGGAATCAGAAGATAATTCAAGTGCCAAACAGCCTGCAGTGGCTGTCGATGAAGAAAACGGTGACGGAGAGAAGACAGAGACTAATGAGGATGACGAAAACAGTGATAGAGAGAAGAGGAAGGCTAACGAAGAGGACGCAAGAGAAGACTCATCACAATCAAAAAGGGCAAAAGTTAAGTTGAGCCATCTCCAAAGTTCAGATGATATCCAAGAAGAAGAAGAAGACATGTAG 795 0.4642 MGKGNPQRGSTGDELHTAARSGDLVAVQMILTSNPLAVNSRDKHSRTPLHLAAFAGHAEIVSYLCKNKADVGASAMDDMAAIHFAAQKGHLEVVKALVAAGASIKACTRKGMNSLHYAAQGSHLELVRYLAKKGASLTAKTRAGKTPLDLANNEEVRSFLEEFERSAKNRASSNKDKAEQSDPKASTLESEDNSSAKQPAVAVDEENGDGEKTETNEDDENSDREKRKANEEDAREDSSQSKRAKVKLSHLQSSDDIQEEEEDM 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00208 264 Pfam Ankyrin repeats (3 copies) 15 73 IPR002110 GO:0005515
Adu05g00208 264 Pfam Ankyrin repeats (3 copies) 82 160 IPR002110 GO:0005515
Adu05g00208 264 PRINTS Ankyrin repeat signature 45 60 IPR002110 GO:0005515
Adu05g00208 264 PRINTS Ankyrin repeat signature 93 107 IPR002110 GO:0005515
Adu05g00208 264 ProSiteProfiles Ankyrin repeat region circular profile. 77 106 - -
Adu05g00208 264 MobiDBLite consensus disorder prediction 217 255 - -
Adu05g00208 264 Gene3D - 76 181 IPR036770 -
Adu05g00208 264 MobiDBLite consensus disorder prediction 167 264 - -
Adu05g00208 264 ProSiteProfiles Ankyrin repeat region circular profile. 44 71 - -
Adu05g00208 264 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Adu05g00208 264 Gene3D - 5 75 IPR036770 -
Adu05g00208 264 MobiDBLite consensus disorder prediction 167 186 - -
Adu05g00208 264 SUPERFAMILY Ankyrin repeat 15 156 IPR036770 -
Adu05g00208 264 SMART ANK_2a 44 73 IPR002110 GO:0005515
Adu05g00208 264 SMART ANK_2a 110 139 IPR002110 GO:0005515
Adu05g00208 264 SMART ANK_2a 77 106 IPR002110 GO:0005515
Adu05g00208 264 SMART ANK_2a 10 40 IPR002110 GO:0005515
Adu05g00208 264 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Adu05g00208 264 PANTHER ANKYRIN REPEAT PROTEIN 4 263 - -
Adu05g00208 264 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
Adu05g00208 264 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Adu05g00208 264 PANTHER - 4 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00208 Adu-Chr5 2230355 2231978 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00208 13 154 Miscellaneous Gene Families AT2G31820 34.483 1.25e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00208 - - ahf:112757970 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00208 05 2230355 2231978 Adu05g00208 05 2230355 2231978 ECH